| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0397 |
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| Symbol | |
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| ID | 5752107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 451014 |
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| End bp | 452582 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641286655 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001552838 |
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| Protein GI | 160873522 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000563336 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAACA GAGTAATTAT ATTTGATACG ACCTTACGTG ATGGCGAGCA GGCGTTAGCC
GCAAGCCTTT CGGTCAAAGA AAAGTTACAG ATCGCCATGG CGCTGGAACG TCTAGGTGTT
GATGTAATGG AAGTGGGTTT TCCAGTCTCA TCACCCGGTG ATTTTGAGTC GGTGCAAACC
ATAGCGCGCA CCATCAAAAA TAGCCGCGTT TGTGCGTTAT CCCGCGCACT TGAAAAGGAC
ATCGATGCCG CGGCGCAGGC CTTGTCTGTT GCAGATCAGT TCCGTATCCA TACGTTTATC
TCGACATCGA CGATTCATGT GGAAAGCAAG CTGAAGCGCT CGTTTGATCA AGTGTTAGAG
ATGGCGGTCA GCGCAGTGAA ATACGCCCGT CGCTTTACCG ACGATGTGGA GTTTTCCTGT
GAGGATGCGG GGCGTACGCC AATCGAAAAT CTGTGTCGCA TGGTGGAGGC CGCCATTCTT
GCTGGCGCGC GTACCATTAA CATTCCCGAT ACGGTCGGTT ACACAGTGCC AAGCGAGTTT
GGCAATATTA TCCAAACCCT GTTTAACCGC GTGCCGAACA TCGACCAAGC GGTGATCTCA
GTGCATTGCC ACGATGACTT AGGTTTATCA GTGGCTAACT CGATAACCGC AGTGCAACAC
GGTGCGCGTC AAATCGAATG TACGATCAAT GGTATAGGTG AGCGTGCGGG TAACTGTTCA
TTGGAAGAGA TCGCTATGAT TTTAGCGACG CGTAAGGGCA TGTTGGGTTT GGAAACAGGC
ATTAACGCTA AGGAAATCCA CCGTACTTCT AATTTAGTCA GCCAGTTATG CAACATGCCT
GTGCAGGCGA ACAAGGCGAT TGTCGGTGCC AATGCGTTCA CTCACTCGTC GGGTATCCAT
CAGGATGGCA TGTTAAAAGC GCAAAATACC TATGAAATCA TGACGCCAGA AAGCATAGGT
TTGAATCGCA ACAATTTGAA TATGACTTCG CGCTCTGGTC GCCATGTGAT CAAGCATCGC
ATGGAAGAAA TGGGCTATAG CGAGCACGAT TACAATATGG ATGCGCTGTA CGAAGAGTTC
CTAAAATTGG CTGATAAAAA GGGCCAAGTA TTTGATTATG ATTTAGAAGC CTTAGCCTTT
ATGGAAGCGC AGGCCGAAGA AGATAATCAC TATCAATTGC AGCAATTAGT GGTGCAGTCT
GACTCTACCG AAGGCGTTGC CACAGCTACC GTTCGTATTG AAGTGGGCGG TGAAATTAAA
ACCGAAGCCG CAACCGGTAA TGGTCCCGTT GATGCCGCCT ATAACGCCAT TGCCCGTGCT
ACTGATCGTC GTATCGACAT CATCAGCTAC AAGTTAGGCG CTAAGGGCGT AGGCCAAAAT
GCCTTAGGTC AAGTGGACAT TACCGCCGTT TACCACGAGC AAAACTTCCA CGGTGTAGGT
TTAGCGACCG ATGTCGTTGA AGCTTCGGCG CGTGCTTTAG TGCATGTGAT GAACTTAACG
TGCCGCGCAG ACAAGGTCGC CGATTACAAA CAAAGCATGC AAAAGAATCG AGAGCTAGGC
GGCGTCTAG
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| Protein sequence | MSNRVIIFDT TLRDGEQALA ASLSVKEKLQ IAMALERLGV DVMEVGFPVS SPGDFESVQT
IARTIKNSRV CALSRALEKD IDAAAQALSV ADQFRIHTFI STSTIHVESK LKRSFDQVLE
MAVSAVKYAR RFTDDVEFSC EDAGRTPIEN LCRMVEAAIL AGARTINIPD TVGYTVPSEF
GNIIQTLFNR VPNIDQAVIS VHCHDDLGLS VANSITAVQH GARQIECTIN GIGERAGNCS
LEEIAMILAT RKGMLGLETG INAKEIHRTS NLVSQLCNMP VQANKAIVGA NAFTHSSGIH
QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYSEHD YNMDALYEEF
LKLADKKGQV FDYDLEALAF MEAQAEEDNH YQLQQLVVQS DSTEGVATAT VRIEVGGEIK
TEAATGNGPV DAAYNAIARA TDRRIDIISY KLGAKGVGQN ALGQVDITAV YHEQNFHGVG
LATDVVEASA RALVHVMNLT CRADKVADYK QSMQKNRELG GV
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