Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0358 |
Symbol | |
ID | 5752068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 405712 |
End bp | 407817 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641286616 |
Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
Protein accession | YP_001552799 |
Protein GI | 160873483 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0267959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC CGAACAGGTA GAATTGCTCA AGCAGGCGTA CCAGATTGCG CGCGATGCCC ACGAAGGGCA AATGCGCACG AGTGGCGAAC CTTATATTAC TCATCCGGTT GCGGTTGCCC GCATCCTTGC TGACATGCGT CTTGATCATG AGACGCTGAT GGCAGCACTG CTCCACGACA CTATCGAAGA TACTCATGTC ACCAAAGACG ATTTAGCCGA ACTATTCGGT GTCGCGGTGG CCGAGCTCGT CGAAGGCGTG TCAAAACTCG ATAAGCTTAA ATTTCGCGAC AAGAAAGAAG CTCAGGCTGA AAACTTCCGT AAAATGATGA TGGCGATGAC GCAGGATATC CGCGTTATCC TCATCAAGCT TGCCGATAGA ACCCACAACA TGCGTACCTT AGGCGCCCTG CGTCCCGACA AACGTCGCCG TATCGCCCGC GAAACCTTAG AAATCTACGC GCCCATCGCT AACCGTCTCG GTATCCATAA CATCAAGACA GAGTTAGAAG ACTTAGGTTT CCAAGCGTAT TACCCCATGC GATATCGGGT GCTTAAAGAA GTCGTTAAAG CCGCCCGTGG CAATCGCAAA GAATTGATCC AAGGCATTGA AGCCGCTGTT TATACGCGCT TAAACGATGC GGGTATTCCA GGGAAAGTTA AAGGCCGCGA GAAAAATCTC TACTCCATCT ATAACAAGAT GCAGAGTAAA GAGCTGCAAT TCCAAGAAGT GATGGATATC TACGCCTTTA GGGTGATAGT CGATTCCATC GACACTTGTT ATCGCGTACT CGGCGCCATG CACGGACTGT ATAAACCTCG CCCCGGTCGT TTCAAAGATT ATATCGCTAT CCCTAAAGCC AACGGCTATC AGTCACTCCA TACCTCTTTG TTTGGTCCAC ACGGCGTGCC CGTTGAGATC CAAATTCGTA CCGAAGATAT GGACCAGATG GCCGACAAAG GGGTTGCCGC ACACTGGGCC TACAAAGGCG GTGCGCAAAC AGGCCAAGGC ACGACGACTC AAGTGCGTGC CCGTAAGTGG ATGCAAAGCT TGTTGGAATT ACAACAAAGC GCCAGCACCT CATTCGAATT CGTTGAAAAC GTGAAGACTG AACTCTTCCC AGAAGAGATT TATGTGTTCA CCCCTGAAGG TCGCATTCTG GAATTACCCG TGAATGCCAC CGCGGTAGAC TTTGCCTACG AAGTGCATAC AGATGTGGGT AATACCTGCG TCGGTGCCCG CGTTAACCGC CAAGCGTATC CGCTCAGCCA GCCGTTAATT TCAGGCCAAA CCGTTGAAAT CATTACCGCT AAAGGCGCGC GTCCGAATGC CGCTTGGCTG AACTTTGTGG TAACAGGTAA GGCCCGCGCC AAAATCCGCC AAGTGCTGAA AAGCCTTAAG GGTGATGACG CAATTGCGCT TGGTCGCCGC CTGCTCAACC ATGCGCTCGG CAAGACTAAG CTCGACAGTA TTCCGCCTGA GCAGATTGAA AAAGTCATTC GCGATACTAA ACATACCACG CTCGATTCAC TGCTCGCCGA CATCGGCCTA GGCAATGCCA TGAGCATTGT TATCGCACAG CGTTTGATTG GCGATAATCT TGAGAATCAA GAAAGCCGCG ACGGCCACAT GATGCCAATT CGTGGCGCCG AAGGTATGCT CGTTACCTTC GCCAACTGTT GCCGCCCAAT CCCTGGTGAT GCCGTAATTG CCCACGTCAG CCAAGGTAAG GGCTTAGTGG TGCACATGGA AAACTGCGCC AACATTCGTG GTTATCAAGG CGAGCCTGAC AAATATATTC CTGTGCAATG GGATAATGTC GAAGGCGTTG ATTACCAAGC CAACCTGCGG GTGGAAATCG TTAACCACCA AGGCGCACTG GCGAAGATCA CCTCGATCAT TGCCGCCGAA GGCTCGAACA TTCACAACCT CAGTACAGAG GAACGAGATG GCCGCGTGTA TTTGATCAAC CTGCGGATTT CGGTGAAAGA CAGGATCCAT TTAGCCAACG TGATGCGCCG AATTAGGGTA CTGCCCGAAG TGCTGCGTAC GTCCCGTAAT CGTTAA
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Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQIA RDAHEGQMRT SGEPYITHPV AVARILADMR LDHETLMAAL LHDTIEDTHV TKDDLAELFG VAVAELVEGV SKLDKLKFRD KKEAQAENFR KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV YTRLNDAGIP GKVKGREKNL YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGAQTGQG TTTQVRARKW MQSLLELQQS ASTSFEFVEN VKTELFPEEI YVFTPEGRIL ELPVNATAVD FAYEVHTDVG NTCVGARVNR QAYPLSQPLI SGQTVEIITA KGARPNAAWL NFVVTGKARA KIRQVLKSLK GDDAIALGRR LLNHALGKTK LDSIPPEQIE KVIRDTKHTT LDSLLADIGL GNAMSIVIAQ RLIGDNLENQ ESRDGHMMPI RGAEGMLVTF ANCCRPIPGD AVIAHVSQGK GLVVHMENCA NIRGYQGEPD KYIPVQWDNV EGVDYQANLR VEIVNHQGAL AKITSIIAAE GSNIHNLSTE ERDGRVYLIN LRISVKDRIH LANVMRRIRV LPEVLRTSRN R
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