| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0328 |
|---|
| Symbol | |
|---|
| ID | 5752038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 370008 |
|---|
| End bp | 371195 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641286586 |
|---|
| Product | benzoate transporter |
|---|
| Protein accession | YP_001552769 |
|---|
| Protein GI | 160873453 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
|---|
| TIGRFAM ID | [TIGR00843] benzoate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00262556 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGAG ATGCAGGGAG TTTGTCAAAA ATATCAGCGG GTTTTATTGC GGTATTGGTG
GGTTATAGCA GCTCGGCTGT GATTATCTTT CAAGCGGCGG AGGCCGTGGG TGCGACACCT
GCACAGATTA GTTCATGGCT GTGGGCTTTA GGTGTGGGCA TGGGCGTGAC CAGCATAGGA
TTATCGCTTT ACTACAAGAA TCCTATTCTA ACGGCTTGGT CGACACCGGG CGCGGCGCTG
ATGGTGACCA GCCTCGCGGG ATTGAGCGTC AACCAAGCCA TAGGCGCGTT TCTGGTGAGT
TCGATTTTAA TTACCCTTTG TGGGATGGCG GGCTGGATGG ATAAACTTAT TCGTATCATG
CCGCAGTCAG TCGCTTCAGC CATGTTGGCG GGGATCCTGC TGCAATTTGG CCTAGGGCTT
TTTCAGGCGA TGCAAACCCA GCTGAGCCTC ATATTGATCA TGCTGTTGGT GTTTGTCGTC
CTTAAGCCTT TTGCGCCGCG CTACATCATC TTGCTGACCT TGCTGGTGGG CATCGGCATG
AGCTTTCAAT TAGATTTACT CAAGTTAGAT GCCGTTCAGT TGCAACTGGC GATGCCGGTA
TGGACCATGC CTGAGTTTTC GCTGGCGAGT GTGATTGGCG TGGCGTTACC GCTGTTTGTG
GTCACTATGG CCTCGCAAAA TATGCCGGGC GTTGCTGCGC TGCACGGTAA TGGCTACAGG
CCGCCTATTT CGCCTTTGAT CACGAGCACA GGGCTAATCG GGGTTATCCT CGCGCCCTTT
GGCGGTTTTG CCTTTAATTT ATCCGCCATT ACAGCGGCGA TTTGCATGGG TAAAGAAGCT
GACCCAAATC CCGCGACCCG CTACTGGGCG GCGGTATGGG GCGGGGTGTT TTACTTTATC
ACTGGGTTAC TCGGCGCCAC TGTGGTTGGT CTGTTTTCCG CTTTCCCGAA GGAATTAGTA
CTGGCCATCG CCGGATTAGC CCTGCTCGGC ACTATCGCCA ATAGCCTGAC TGCCGCATTA
GCTAAAACCG AAGATCGCGA AGTAGCGGTG ATCACTTTCT TGGTCACGGC ATCGGGTTTT
AGTGTGCTGG GCATCGGCAG CGCATTTTGG GGGCTGTTGC TTGGGTTTAT TATCCATTGG
TGGAACGGGC ACAGAACTGC ATCAGTAGTT AAGCGAGCGA ATACTTAA
|
|---|
| Protein sequence | MWRDAGSLSK ISAGFIAVLV GYSSSAVIIF QAAEAVGATP AQISSWLWAL GVGMGVTSIG
LSLYYKNPIL TAWSTPGAAL MVTSLAGLSV NQAIGAFLVS SILITLCGMA GWMDKLIRIM
PQSVASAMLA GILLQFGLGL FQAMQTQLSL ILIMLLVFVV LKPFAPRYII LLTLLVGIGM
SFQLDLLKLD AVQLQLAMPV WTMPEFSLAS VIGVALPLFV VTMASQNMPG VAALHGNGYR
PPISPLITST GLIGVILAPF GGFAFNLSAI TAAICMGKEA DPNPATRYWA AVWGGVFYFI
TGLLGATVVG LFSAFPKELV LAIAGLALLG TIANSLTAAL AKTEDREVAV ITFLVTASGF
SVLGIGSAFW GLLLGFIIHW WNGHRTASVV KRANT
|
|---|
| |