| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0327 |
|---|
| Symbol | |
|---|
| ID | 5752037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 369306 |
|---|
| End bp | 369881 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641286585 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001552768 |
|---|
| Protein GI | 160873452 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000523898 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACGA TAAACAGCTA TCTCGCCACC ACGCTTAAAG CACTTCGCAA CCAAAAGGGA
TGGAGTTTAG ATAAAGCCGC CCAAGAGACG GGCGTCAGCA AGGCCATGAT AGGACAAATC
GAGCGCGGTG AATCTAGCCC AACCATTGCG ACGCTGTGGA AAATTGCCAG TGGATTCAAT
ATCTCGCTTT CGACCTTTCT CGAACCCACG CCCCAGAGCC AAGGCGCTGT ATTCCGTAAG
CCCGACGAGT TACGCCAACA ACCAGCCACC GACGGCATGC TAGTCGCCTC ACTGTTTCCC
TTTGAAGACC GTTTCGGTTT TGAGATGTTT GAACTCACCC TGCTGCCAAA CTATGAGCGA
CTTTCTGAGC CCCATGAAGC CGGCGTCACT GAACATGTCA TTGTATTAAG CGGTACTATG
GAAGTGTTAG TCGATGGACA GTGGCAAACG CTCAAGCAAG GTGAAGCGGT ACGATTTGCG
GCCGACAAAC CCCATGGCTA TCGAAATCTA AACGAGCAAG CCGTGGTATT CCACGACATC
ATTCATTATC AACGAGGCAG TGAATCTAGC TTGTAG
|
|---|
| Protein sequence | MQTINSYLAT TLKALRNQKG WSLDKAAQET GVSKAMIGQI ERGESSPTIA TLWKIASGFN
ISLSTFLEPT PQSQGAVFRK PDELRQQPAT DGMLVASLFP FEDRFGFEMF ELTLLPNYER
LSEPHEAGVT EHVIVLSGTM EVLVDGQWQT LKQGEAVRFA ADKPHGYRNL NEQAVVFHDI
IHYQRGSESS L
|
|---|
| |