| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0323 |
|---|
| Symbol | |
|---|
| ID | 5752033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 367223 |
|---|
| End bp | 367675 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641286581 |
|---|
| Product | thioesterase domain-containing protein |
|---|
| Protein accession | YP_001552764 |
|---|
| Protein GI | 160873448 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.42127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAT TACTTACTCA ACTACTCATT CAATTACGCC AGACGTGGCA CAGTACTATT
CCTGTTAGCG AGTTTATGCA GATTGCGCCG CTTGATTACA GCGAGGGTGA GTTTCGAGTC
ACAGCGCCGA TAGCGCCTAA TATTAATCTG CATCAGACCA TGTTTGCCGG CAGCATTTAT
ACCTTGATGA CCTTAACTGG CTGGGGCGCT GTGTGGCTGA ACCAGCAGTT AGCTGGCGTT
GCGGGTGACA TTGTGCTCGC CGATGCCCAT ATTCGTTATC TCGCCCCAGT GACTTGTGAC
CCCGTGGTAA CAGTGCAATG GCCAACTGTG GATCTTAGTC CGTTGCAAAG AGGTCGCAGA
GTGAAAGTGA AGTTAGCAGT GCAATTGTAT TGTGATGCTA AGCTTTGTGC GGTATTCGAA
GGTCTGTATG TCAGTGCGCC GAAAGCGAGT TAA
|
|---|
| Protein sequence | MDELLTQLLI QLRQTWHSTI PVSEFMQIAP LDYSEGEFRV TAPIAPNINL HQTMFAGSIY
TLMTLTGWGA VWLNQQLAGV AGDIVLADAH IRYLAPVTCD PVVTVQWPTV DLSPLQRGRR
VKVKLAVQLY CDAKLCAVFE GLYVSAPKAS
|
|---|
| |