Gene Sbal195_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0313 
Symbol 
ID5752023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp357879 
End bp358901 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID641286571 
Productdiguanylate cyclase 
Protein accessionYP_001552754 
Protein GI160873438 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCA ACCGACAGCA ACTGATCCGT TCGTTATTTG ACGAATATAT TGAGATGTAT 
TCCTCCCGTG ATGACAGGCT AACCCACCGC TTTAGTGAGA ACTTTAGCGG CTATGCTGGC
AGTAGTGACC AGCTTGTCAC CGATAGGGAA GAATGGGTGC GGATCACTCG GCAGGACTTT
GCACAAGTGC CTGAGCGGAT CCATATCGAA ATGTTAGCTC TCTCCTTACA AGATCTTGCC
GACAACCTCG TGGTTGTGAC TGCCTTTTTC CATATCCACT TACCCATCCC TAATCCTATG
CTTTCCCGCG AGACAGCACG GCTAGTATTG ATATTTCGTT TAGAACACAA AGACTGGATG
ATTGCCCACA GTGGCATATC CATCCCCTAC GGCTTAGCCC ACAAAGGGGA GATTTACCCG
ATAGCACGAT TAGAGGAACG TAATGTCGAA CTTGAATCCA TGATCAAGGC ACGAACCTGT
GAGCTGGCAG AAGCCAATAG GCAACTCGAA ATACTCAGCA ATACCGATGG TTTAACCAAT
ATCGGCAACC GCCGCCTATT TGACATGATG TTACAAACGG AGTGGAGCCG AGGACAAAGG
AGCAACTCAT CACTGGCTCT CATCATGCTC GATATTGACC ACTTCAAACA ATTTAACGAT
CACTATGGCC ACCTCGCCGG CGATGATTGT CTTAAACAAC TGGCCAGTAC TTTGTCCCAA
TCCGGCCGCA GAGCGGGCGA ACTCGTGGCT CGCTACGGTG GTGAGGAATT TGTCATTCTG
TTGCCCAATA TCGACAAACA AACGGTACTC GACACAGCGC AGCATATTCA TCAGTTAATC
CAAGCCATTG CCATTCCACA TGCGGATACC GACCTTGGTA TTGTGACCGT CAGTGCAGGA
GTCGCTTATT TGCAACCCTC AAACCAACAA AGCCATTTAG AGTTAGTTCG CCAAGCCGAT
GCCGCGCTTT ACCGTGCAAA ATCAGCAGGC CGCAATTGCA TACGGGTGAT GAATGAGGAG
TAA
 
Protein sequence
MRPNRQQLIR SLFDEYIEMY SSRDDRLTHR FSENFSGYAG SSDQLVTDRE EWVRITRQDF 
AQVPERIHIE MLALSLQDLA DNLVVVTAFF HIHLPIPNPM LSRETARLVL IFRLEHKDWM
IAHSGISIPY GLAHKGEIYP IARLEERNVE LESMIKARTC ELAEANRQLE ILSNTDGLTN
IGNRRLFDMM LQTEWSRGQR SNSSLALIML DIDHFKQFND HYGHLAGDDC LKQLASTLSQ
SGRRAGELVA RYGGEEFVIL LPNIDKQTVL DTAQHIHQLI QAIAIPHADT DLGIVTVSAG
VAYLQPSNQQ SHLELVRQAD AALYRAKSAG RNCIRVMNEE