Gene Sbal195_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0299 
Symbol 
ID5752009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp338196 
End bp340373 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content47% 
IMG OID641286558 
ProductTonB-dependent receptor 
Protein accessionYP_001552741 
Protein GI160873425 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00020356 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA AAACCTCGTT TGTTGCTTTA GCCGTATTTG CAGCGCTAAG CCAATCCGCA 
GCGGCCCAAG ATGCTCCCGA TAGCAATTCA AACAACAAAA ATAAAGACAT AGAAAAAATT
ACAGTCACCG CGAGTCGGAT GGATAAATCT CCAAGCTCGA TCCCCAATAC TGTCACTATT
ATTGACCGCG CCCAGTTAGA AGAGCAGTTC CGCACTACTA AAGATTTGTC GACCATTATC
GGTAACTTAG CCCCGAGCTT TTCGCCAAGC CGCCAGAAGA TGAGTAACAC AGGCGAAACC
CTGCGTGGTC GTCCGCCGCT GATCATGATC GACGGCGTAC CGCAATCAAA CCCACTTCGC
AGTGGGGGTC GCTCGGGTCA AACCATAGAT CCAGCCATGA TTGAGCGTAT TGAAATCATT
CACGGTGCCA ATGCAATGCA CGGTCTTGGT GCCCAAGGCG GCATCATCAA TTACATCACT
AAAAAACCGA CGGGCGACAG CGAACAGGTT GCAAGTTTCG ATGTGACAGT TCCTGATTCG
ATGAAATCCA ACGGCTTAAG CTTTGGTGCC AGCTATGCGT TTTCTGGCGA GTCAGAATTT
ATCGACATGA TAGGCTCGGT TAGCTATCGC AATAATGGCG TCTATTACGA TGCCAACCAT
AACGTCGTTG GTGTGGACAC GACTCAAGGC GAGTCGATGG ACAGCCAAAG CAAAGACTTC
TTCATTAAGC TTGGCCACAA CTTCGACGAG TCGCGCCTTG AGTTAATGGT TAACCATTAC
ACCGCAGACA ATAATGGCGA TTGGATGCCA GTTGCAGGCG ACAAACCCGA TGGCGTGCCC
ACGGGCGCAG TTAAAGAAAC CCAGCCATGG GAAGCGGCTA ACAACCAAGT GACCACCACC
AGTTTGACTT ATACCCACGC CAACATTGGT GGCCAACAAC TTAACCTGCA ACTCTTTAAT
CAAGATTTTA AAGCGGTTTA TGGTGGCGGC TGTTTCGACA GTTTCTACGA TCCATCCTTC
GAAGGTAGCG ACCAAGTGAT CCAGTGCGGT GTCGGCAGTA AAGGCGAAAG CTTGTACTAC
GAGCAATCGC GTAATGCTTC AGTTAAATGG GGGTTAAAAA GCTCATTGAT TGCTAAAGAT
ATTGCGGGTT CAGGGATTGA TGCGGCCTAC GGTGTCGACC TTTTCCGCGA TACCACAGAG
CAAGATTTAG TGAAAACGGG TTTTTCGTGG GTTCCGGAAA GCACCTATGA CAACGTCGCG
CCATACTTGC AGTTAGATTA TGATTTAATT GAAAATCTAA CCTTATCGAC TGGTGTTCGT
TACGAACATG CCGCGTTGAG TGTCGATGAC TACAAAACCC TATGGGGTGC GGGCAACAAG
CAAATTGCAG GCGGTTCGGC CACCTTCGAT GAAACCTTAT TCAACGTCGG TATCTCCTAC
AAAATCACCC CAGACATTCG CGTTTATACC AGCTATAACC AAGGTTTTGG TATGCCGGAT
ATCGGCCGTA TTCTGCGTGA TGGTAAAAGC TTCCCAGGCG ACAATCCCAG CATAGATGAC
TCATTGGCAC TCACGCCGAT CGTCACAGAT AACGTCGAAG TTGGTGCCGA TTATCAAGGT
AAATACTTAA GCGCTAAGTT TGCATATTAT CGTTCGGCCA CTGATTTTGG CTCACGTTTA
GCCTTAAATG GCGATGGTTT TTACGACGTG AAGCGGGAAA AAAGTGTCAT CGAGGGTATC
GAAGCCAATG TTACCGCCTA CCTCACCAGC AATGATGATC TTGGCATGAA CATCGCCATT
CAACAGGGCG AATACGATTC AAATGGTGAT AACAAAGTCG ATACCGATCT CGATGGCGCA
AATATTTCGC CAAACCGTAT CAACCTGTTC TGGACCCATA ACTTCGATAA TGACATGTCG
ACCCGCGTTC AAGCCAACTA CTACATGGAC CGCGACTTTA AAAATGCTGC GGGCAACAAG
TATGCGGAAT TTGATGGCTA TACCACAGTC GATGCTTCCT TCTCTATGCC GCTTTACACT
GGCACCCTGA GCTTAGGTCT GCAAAATCTG TTTAATAAGG ATTATTTCAA TTATTACTCA
CAAACCATGG GTACAAATGA TCGTTATTTC AAAGGCATGG GACGTACTGC GACAATAGGC
TACACCTTGC CTTTCTAA
 
Protein sequence
MTFKTSFVAL AVFAALSQSA AAQDAPDSNS NNKNKDIEKI TVTASRMDKS PSSIPNTVTI 
IDRAQLEEQF RTTKDLSTII GNLAPSFSPS RQKMSNTGET LRGRPPLIMI DGVPQSNPLR
SGGRSGQTID PAMIERIEII HGANAMHGLG AQGGIINYIT KKPTGDSEQV ASFDVTVPDS
MKSNGLSFGA SYAFSGESEF IDMIGSVSYR NNGVYYDANH NVVGVDTTQG ESMDSQSKDF
FIKLGHNFDE SRLELMVNHY TADNNGDWMP VAGDKPDGVP TGAVKETQPW EAANNQVTTT
SLTYTHANIG GQQLNLQLFN QDFKAVYGGG CFDSFYDPSF EGSDQVIQCG VGSKGESLYY
EQSRNASVKW GLKSSLIAKD IAGSGIDAAY GVDLFRDTTE QDLVKTGFSW VPESTYDNVA
PYLQLDYDLI ENLTLSTGVR YEHAALSVDD YKTLWGAGNK QIAGGSATFD ETLFNVGISY
KITPDIRVYT SYNQGFGMPD IGRILRDGKS FPGDNPSIDD SLALTPIVTD NVEVGADYQG
KYLSAKFAYY RSATDFGSRL ALNGDGFYDV KREKSVIEGI EANVTAYLTS NDDLGMNIAI
QQGEYDSNGD NKVDTDLDGA NISPNRINLF WTHNFDNDMS TRVQANYYMD RDFKNAAGNK
YAEFDGYTTV DASFSMPLYT GTLSLGLQNL FNKDYFNYYS QTMGTNDRYF KGMGRTATIG
YTLPF