Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0299 |
Symbol | |
ID | 5752009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 338196 |
End bp | 340373 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641286558 |
Product | TonB-dependent receptor |
Protein accession | YP_001552741 |
Protein GI | 160873425 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00020356 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA AAACCTCGTT TGTTGCTTTA GCCGTATTTG CAGCGCTAAG CCAATCCGCA GCGGCCCAAG ATGCTCCCGA TAGCAATTCA AACAACAAAA ATAAAGACAT AGAAAAAATT ACAGTCACCG CGAGTCGGAT GGATAAATCT CCAAGCTCGA TCCCCAATAC TGTCACTATT ATTGACCGCG CCCAGTTAGA AGAGCAGTTC CGCACTACTA AAGATTTGTC GACCATTATC GGTAACTTAG CCCCGAGCTT TTCGCCAAGC CGCCAGAAGA TGAGTAACAC AGGCGAAACC CTGCGTGGTC GTCCGCCGCT GATCATGATC GACGGCGTAC CGCAATCAAA CCCACTTCGC AGTGGGGGTC GCTCGGGTCA AACCATAGAT CCAGCCATGA TTGAGCGTAT TGAAATCATT CACGGTGCCA ATGCAATGCA CGGTCTTGGT GCCCAAGGCG GCATCATCAA TTACATCACT AAAAAACCGA CGGGCGACAG CGAACAGGTT GCAAGTTTCG ATGTGACAGT TCCTGATTCG ATGAAATCCA ACGGCTTAAG CTTTGGTGCC AGCTATGCGT TTTCTGGCGA GTCAGAATTT ATCGACATGA TAGGCTCGGT TAGCTATCGC AATAATGGCG TCTATTACGA TGCCAACCAT AACGTCGTTG GTGTGGACAC GACTCAAGGC GAGTCGATGG ACAGCCAAAG CAAAGACTTC TTCATTAAGC TTGGCCACAA CTTCGACGAG TCGCGCCTTG AGTTAATGGT TAACCATTAC ACCGCAGACA ATAATGGCGA TTGGATGCCA GTTGCAGGCG ACAAACCCGA TGGCGTGCCC ACGGGCGCAG TTAAAGAAAC CCAGCCATGG GAAGCGGCTA ACAACCAAGT GACCACCACC AGTTTGACTT ATACCCACGC CAACATTGGT GGCCAACAAC TTAACCTGCA ACTCTTTAAT CAAGATTTTA AAGCGGTTTA TGGTGGCGGC TGTTTCGACA GTTTCTACGA TCCATCCTTC GAAGGTAGCG ACCAAGTGAT CCAGTGCGGT GTCGGCAGTA AAGGCGAAAG CTTGTACTAC GAGCAATCGC GTAATGCTTC AGTTAAATGG GGGTTAAAAA GCTCATTGAT TGCTAAAGAT ATTGCGGGTT CAGGGATTGA TGCGGCCTAC GGTGTCGACC TTTTCCGCGA TACCACAGAG CAAGATTTAG TGAAAACGGG TTTTTCGTGG GTTCCGGAAA GCACCTATGA CAACGTCGCG CCATACTTGC AGTTAGATTA TGATTTAATT GAAAATCTAA CCTTATCGAC TGGTGTTCGT TACGAACATG CCGCGTTGAG TGTCGATGAC TACAAAACCC TATGGGGTGC GGGCAACAAG CAAATTGCAG GCGGTTCGGC CACCTTCGAT GAAACCTTAT TCAACGTCGG TATCTCCTAC AAAATCACCC CAGACATTCG CGTTTATACC AGCTATAACC AAGGTTTTGG TATGCCGGAT ATCGGCCGTA TTCTGCGTGA TGGTAAAAGC TTCCCAGGCG ACAATCCCAG CATAGATGAC TCATTGGCAC TCACGCCGAT CGTCACAGAT AACGTCGAAG TTGGTGCCGA TTATCAAGGT AAATACTTAA GCGCTAAGTT TGCATATTAT CGTTCGGCCA CTGATTTTGG CTCACGTTTA GCCTTAAATG GCGATGGTTT TTACGACGTG AAGCGGGAAA AAAGTGTCAT CGAGGGTATC GAAGCCAATG TTACCGCCTA CCTCACCAGC AATGATGATC TTGGCATGAA CATCGCCATT CAACAGGGCG AATACGATTC AAATGGTGAT AACAAAGTCG ATACCGATCT CGATGGCGCA AATATTTCGC CAAACCGTAT CAACCTGTTC TGGACCCATA ACTTCGATAA TGACATGTCG ACCCGCGTTC AAGCCAACTA CTACATGGAC CGCGACTTTA AAAATGCTGC GGGCAACAAG TATGCGGAAT TTGATGGCTA TACCACAGTC GATGCTTCCT TCTCTATGCC GCTTTACACT GGCACCCTGA GCTTAGGTCT GCAAAATCTG TTTAATAAGG ATTATTTCAA TTATTACTCA CAAACCATGG GTACAAATGA TCGTTATTTC AAAGGCATGG GACGTACTGC GACAATAGGC TACACCTTGC CTTTCTAA
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Protein sequence | MTFKTSFVAL AVFAALSQSA AAQDAPDSNS NNKNKDIEKI TVTASRMDKS PSSIPNTVTI IDRAQLEEQF RTTKDLSTII GNLAPSFSPS RQKMSNTGET LRGRPPLIMI DGVPQSNPLR SGGRSGQTID PAMIERIEII HGANAMHGLG AQGGIINYIT KKPTGDSEQV ASFDVTVPDS MKSNGLSFGA SYAFSGESEF IDMIGSVSYR NNGVYYDANH NVVGVDTTQG ESMDSQSKDF FIKLGHNFDE SRLELMVNHY TADNNGDWMP VAGDKPDGVP TGAVKETQPW EAANNQVTTT SLTYTHANIG GQQLNLQLFN QDFKAVYGGG CFDSFYDPSF EGSDQVIQCG VGSKGESLYY EQSRNASVKW GLKSSLIAKD IAGSGIDAAY GVDLFRDTTE QDLVKTGFSW VPESTYDNVA PYLQLDYDLI ENLTLSTGVR YEHAALSVDD YKTLWGAGNK QIAGGSATFD ETLFNVGISY KITPDIRVYT SYNQGFGMPD IGRILRDGKS FPGDNPSIDD SLALTPIVTD NVEVGADYQG KYLSAKFAYY RSATDFGSRL ALNGDGFYDV KREKSVIEGI EANVTAYLTS NDDLGMNIAI QQGEYDSNGD NKVDTDLDGA NISPNRINLF WTHNFDNDMS TRVQANYYMD RDFKNAAGNK YAEFDGYTTV DASFSMPLYT GTLSLGLQNL FNKDYFNYYS QTMGTNDRYF KGMGRTATIG YTLPF
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