Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0296 |
Symbol | |
ID | 5752006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 335781 |
End bp | 336473 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286555 |
Product | pseudouridine synthase Rlu family protein |
Protein accession | YP_001552738 |
Protein GI | 160873422 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCGAA TCATAGCCGA TGAGGCTGAC TTCCTTGTTA TCTCCAAATC AGCCAAAGTG CATTTTCACA GTCAGGACGG AACAGCGGGC GTAGTGGCGC AGGCTGAGCA AGATCTGGGG ATTAAGCTTT TTGCCGTGCA TAGATTAGAC ACGCCCACGT CCGGTCTGTT GATTCTGGCC AAAAGCGCCG GCGCTGCCAA GCAATTTACA GAGCTATTTA CCGCCCATAA AGTGCAGAAA TATTACCTCG CCCTTGCGAA AGGTAAGCCG AAGAAGAAGC AAGGCTGGGT GATTGGTGAC ATGGCAAAGT CGCGGCGTAG TATGTTTAAA CTGCTGCGCA CTAAAGAAAA TCCAGCGATT ACGCAGTTCT TTTCATTAAG TGTCAGTGAG GGATTGCGTT TATATTTACT GAAACCCCAT TCGGGTAAAA CCCATCAATT AAGAGTCGCC TTGGCAAGCT TAGGTGTGCC GATTTTAGGC GATGATTTAT ACGGTGGTAT GGCTGCGGAT CGTTGCTATC TACATGCCTA CTGTCTGCAT TTTCGCTATG GCGATGAAGC GACTGGCTGG CGTGATTACG CGTATAGGGA TGTGCCGACT CAGGGTGAAC ATTTTGCCGC TGAAGGTGTG ACTGAAGCGC TGATTGAGTG GTCTGAACCC GATACTTTGG CTTGGCCGGC GAAAGGGGAT TAA
|
Protein sequence | MYRIIADEAD FLVISKSAKV HFHSQDGTAG VVAQAEQDLG IKLFAVHRLD TPTSGLLILA KSAGAAKQFT ELFTAHKVQK YYLALAKGKP KKKQGWVIGD MAKSRRSMFK LLRTKENPAI TQFFSLSVSE GLRLYLLKPH SGKTHQLRVA LASLGVPILG DDLYGGMAAD RCYLHAYCLH FRYGDEATGW RDYAYRDVPT QGEHFAAEGV TEALIEWSEP DTLAWPAKGD
|
| |