| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0270 |
|---|
| Symbol | |
|---|
| ID | 5751980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 308922 |
|---|
| End bp | 309614 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641286529 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_001552712 |
|---|
| Protein GI | 160873396 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA ATATATTAAT GGTACTAACT TCACACGATA AACTCGGCGA CACAGGTTTA
AAAACCGGCT TTTGGCTCGA AGAATTCGCC TCACCTTTTT ATGAGTTTAA AGATAAAGGT
TTTGACATTA CCTTAGCCTC GCCATTGGGC GGTCAACCAC CGCTCGATCC AAAAAGTGAT
GAGCCAGACT TTCAAACCGA AGCCACTGCG CGCTTTAGCA AAGATCCTGA GGCACAAGCA
CTGCTAGCAA ATACCACTCG CTTAAGTGAA ATCAACACAG CTGATTATGA TGCGGTTTTC
TATCCAGGCG GCCACGGCCC ACTGTGGGAT CTTGCCGAAG ATCAACATTC TATTGCCTTG
ATTGAACAGT TCTATCAAGC GAATAAACCC CTAGGACTCG TCTGTCATGC GCCTGCGGCA
CTACTGCACC CTAAAGCCAG TGATGGTAAG CCATTGGTCA GTGGCAAGCG CGTTACCGGT
TTCAGTAATT CTGAAGAAGA AGCAGTGCAA CTTACTCATA TCGTGCCATT TTTAGTCGAA
GACATGCTGC AGAAAAACGG CGGCACTTAT GTCAAAGGTG ATGATTGGAC AAGCTTTGTT
GTCGCAGATG GCCATTTGAT CACAGGTCAA AACCCTGGAT CATCCGAAGC CGTTGCGCAG
GCCATCGTCG CGCAACTGAA CGCCAGAGGC TAA
|
|---|
| Protein sequence | MKMNILMVLT SHDKLGDTGL KTGFWLEEFA SPFYEFKDKG FDITLASPLG GQPPLDPKSD
EPDFQTEATA RFSKDPEAQA LLANTTRLSE INTADYDAVF YPGGHGPLWD LAEDQHSIAL
IEQFYQANKP LGLVCHAPAA LLHPKASDGK PLVSGKRVTG FSNSEEEAVQ LTHIVPFLVE
DMLQKNGGTY VKGDDWTSFV VADGHLITGQ NPGSSEAVAQ AIVAQLNARG
|
|---|
| |