Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0250 |
Symbol | |
ID | 5751960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 287146 |
End bp | 287907 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641286509 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001552692 |
Protein GI | 160873376 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGA CTCCAATTGC ACTTATCACT GGCGCTAGCC GCGGTTTAGG TAAAAACACT GCTCTGAAAT TAGCGGCGCA GGGGATAGAT ATTATCCTGA CCTATCAGAC GAATGCTGCA GCGGCCGCTG AAGTGGTCGC CGAGATTGAA TGGCTGGGAC GCAAAGCGGT AGCACTGCCG CTGGATGTGA GCGATAGCGG CTCATTTGCC GAGTTTGCCA CCCAAGTTAG CACTGTATTA GCTCATACTT GGCAGCGGGA GTCATTTAAC TATTTGATTA ACAATGCTGG TATCGGGATT CATGTGCCTA TGGCGGAAAC CAGTATCGAA CAGTTCGATA CCTTGATGAA CATCCACGTC AAAGGACCGT TCTTTTTGAC TCAAACCTTA TTGCCACTGC TGATGGATGG GGGAAGCATT GTCAATATTT CCACCGGCTT GACGCGCTTT GCGATTCCCG GATTTGGCGC GTATGCCACT ATGAAGGGCG CGGTCGAAAC TATGACTAAG TATTGGGCGA AGGAGTTAGG CCCACGGGGT ATTCGGGTCA ATGTGCTTGC CCCTGGGGCG ATTGAAACAG ATTTTGGCGG CGGTGCTGTA CGGGATAATG AACAGATGAA TCAGTTTTTA GCGCAGCAAA CTGCGTTAGG ACGTGTGGGC TTGCCGGACG ATATCGGCGG CGCGATTAGT GCCTTGTTAT CGCCTGCGGC CGCTTGGATT AATGCCCAGC GTATCGAAGC TTCTGGCGGT ATGTTTCTTT AG
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Protein sequence | MNTTPIALIT GASRGLGKNT ALKLAAQGID IILTYQTNAA AAAEVVAEIE WLGRKAVALP LDVSDSGSFA EFATQVSTVL AHTWQRESFN YLINNAGIGI HVPMAETSIE QFDTLMNIHV KGPFFLTQTL LPLLMDGGSI VNISTGLTRF AIPGFGAYAT MKGAVETMTK YWAKELGPRG IRVNVLAPGA IETDFGGGAV RDNEQMNQFL AQQTALGRVG LPDDIGGAIS ALLSPAAAWI NAQRIEASGG MFL
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