| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0242 |
|---|
| Symbol | |
|---|
| ID | 5751952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 282188 |
|---|
| End bp | 282847 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641286501 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001552684 |
|---|
| Protein GI | 160873368 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTGC TATTGATTGA AGATGATACT GATCTGGTCG CGCGCCTCAT CCCCGCCCTT
AACAAGGCGG GTTATACCGT CGAGCACGCC GATAACGGTA TCGACGGTGC CTTTTTAGGC
GAAGAAGAAA ACTTCGAAGC CGTGATCCTC GATCTCGGTT TACCCGGCAA ACCCGGTTTA
CAAGTCCTCG GCCAATGGCG ACAAAAAGGC TTAGCCATGC CAGTGCTGAT CCTCACCGCT
CGCGATGCGT GGCACGAGCG GGTCGATGGC CTCAAGGCGG GTGCCGATGA TTACCTTGGC
AAGCCTTTTC ATATTGAAGA ACTACTCGCA AGGCTCGAAG TGTTGATCCG CCGCCACTTT
GGCCGCGCCG ACAATGTGTT ACAACATGCG GGCGTTTCCC TCGATGTCGA CAAACAAGCC
GTCACCAATG TCGACGGTGA AGTGATAGAG CTGACTAAGA TTGAATATCG CCTACTGCAT
TATTTAATGG TCAATCCCAG TAAAATCGTC TCTAAGTCAG AGCTCAGTGA ACGCATTTAC
GAAGAAGATC AAATCAAGGA CAGCAATGTC ATCGAAGTGT ACGTCAACCG CCTGCGCCAA
CGCTTAGGCA AGGATTATAT CGAAACCCGT CGCGGCCAAG GTTATCGACT CAAGGAGTAA
|
|---|
| Protein sequence | MRLLLIEDDT DLVARLIPAL NKAGYTVEHA DNGIDGAFLG EEENFEAVIL DLGLPGKPGL
QVLGQWRQKG LAMPVLILTA RDAWHERVDG LKAGADDYLG KPFHIEELLA RLEVLIRRHF
GRADNVLQHA GVSLDVDKQA VTNVDGEVIE LTKIEYRLLH YLMVNPSKIV SKSELSERIY
EEDQIKDSNV IEVYVNRLRQ RLGKDYIETR RGQGYRLKE
|
|---|
| |