| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0236 |
|---|
| Symbol | |
|---|
| ID | 5751942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 271703 |
|---|
| End bp | 272182 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641286491 |
|---|
| Product | cytochrome C biogenesis protein |
|---|
| Protein accession | YP_001552678 |
|---|
| Protein GI | 160873362 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
|---|
| TIGRFAM ID | [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000417062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.56744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC TGACAAAAAT CATTGGTGGT CTAGTGCTGT TATTCAGCAT GACGACCGCC
GTTATGGCAA CACCGGTTGA TACTTACGAA TTCAAAACGC CTGAAAATCA AAAGCGCGGT
TTGTCTTTGG CACATGAGCT ACGTTGCCCA CAGTGTCAAA ATCAAAACTT GATCGACTCA
AACTCACCAG TTGCGCGCGA TCTGCGTCTT GAAGTCTTCA AGATGGTAGA CGAAGGCAAA
GGAGATGATG AGATCATCGA GTTTATGACC AGCCGTTACG GTGAGTTCGT ACTCTATAAC
CCAAAGATGG AAACCAAAAC CTACATTCTT TGGTTAGGTC CTATTGGTTT GTTACTTATG
GGCCTCGTGA TTGGTTTTAT CTTCATTCGT AAACAACGTA TCAGCGGTAA TGTGCCGAAC
GAAATTAGCG AAGAAGATCA GCGAGAGTTA GATACCTTGC TAAAGCGTAA TACTAAATGA
|
|---|
| Protein sequence | MRTLTKIIGG LVLLFSMTTA VMATPVDTYE FKTPENQKRG LSLAHELRCP QCQNQNLIDS
NSPVARDLRL EVFKMVDEGK GDDEIIEFMT SRYGEFVLYN PKMETKTYIL WLGPIGLLLM
GLVIGFIFIR KQRISGNVPN EISEEDQREL DTLLKRNTK
|
|---|
| |