| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0159 |
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| Symbol | |
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| ID | 5751856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 187496 |
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| End bp | 188275 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641286405 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001552601 |
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| Protein GI | 160873285 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0570071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAA AACTGACTAG TGTGCAGCGG GGATTTACCC TGCTAGAAAT GCTGATCGCC
ATCGCGATTT TCGCCATGAT AGGTTTGGCT TCTAATGCCG TGCTCAGCAC TGTGCTGACT
AACGATGAAG TGACGCGCAC TTTCTCTACT CGGCTTAAGG CCCTGCAGCA AGGCTTTGGT
GCGATTGAGC GTGATCTCGC CCAAATGGTG GCGCGTACAC CCAGATTACT CGAAGGGGGT
CGAGGTTCGA CCGTCTTCCA AACGGGCAAT GATATCTTAG ACTCGGAATC AGAAGCCTTA
GTGTTTTACC GTTTAGGTTG GTTAAATCCC GACGGTTTAT TACCGCGGGG CAGCTTACAG
TCTGTGGCGT ATGTGGTGCA CGAAGGGAGA CTGGAGCGTT GGTATTTTCC TTATCCTGAG
CCTGAATTTG GTGCCGAGCC GATTAAGACA GTGGTCATAG ATAAAGTATT GTCGGTGGAA
TATTCCTTCT TTATGGATGA CAAATGGGAG CGCAAAGTCG AGGCGACTAA GTTGCCTAAA
GCGATCGCCA TGGAAATTGA GATTGAAGGC TTAGGCAAGA TCCAACGTAA GTTCTTGCTG
CCGCTAGGTG CTGCCGCACC AGACAAGTCC AAGGATGAAG ACAATAAAGA CGAAAATCCA
GACGATGCTA ACAAAGATAA AAACGGCTCA GGTAACGGCA ATGGAACTGG CAATGGTTCC
GGCAACCCAG ATTCTGGCGA TTCCGGAGAC GGCGATCCAG ACGCAGAGGG CCGCGAATGA
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| Protein sequence | MSLKLTSVQR GFTLLEMLIA IAIFAMIGLA SNAVLSTVLT NDEVTRTFST RLKALQQGFG
AIERDLAQMV ARTPRLLEGG RGSTVFQTGN DILDSESEAL VFYRLGWLNP DGLLPRGSLQ
SVAYVVHEGR LERWYFPYPE PEFGAEPIKT VVIDKVLSVE YSFFMDDKWE RKVEATKLPK
AIAMEIEIEG LGKIQRKFLL PLGAAAPDKS KDEDNKDENP DDANKDKNGS GNGNGTGNGS
GNPDSGDSGD GDPDAEGRE
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