| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0138 |
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| Symbol | |
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| ID | 5751835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 159857 |
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| End bp | 163081 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641286384 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001552580 |
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| Protein GI | 160873264 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCAG CGCTACACCA CCTCAGTTTG AAGCAAAAGC TCATTCTGTT TTCGCTTGTC
CCCTTGTTGA TGATGAGTTT TTTTATTCTG ACTCGCATGC ATGGCTTAAT AAATGAATCA
CACTCGGCCA AGCACAACCA TCTTGCAGTG CAGACGACGG TACAAATCAC TGAATTACTG
TATCAATTGC AGAACGAATA TGGCCTTAGC ACCAATCAAC TGCCCGCCGA TAACGCGCTA
CTCGCGCAAC AACAGGCGAC CTCCAACGCA TTCAATACGT TACTTAACAG CGAACCTTTA
GCCCACCTCA GTGAGGCACT CGATCCTAAG AGTATTGAAG CCAGTCAGAT GAACGCATTA
TTAGATGCCA TCACACTCAC GGGCCACAGA CTCGCCAACG CACGCCAAAC CCTTGCGAGC
GAAACACAAA GCCCGCTTAC TGACCTCTAT AGCCAACTGC ACACTCAGCT GTTGCAGCTC
ATTCAACTAT TACAGTTACA GACCAGCGAA ATCAGCCAAT CCCGCGCCTA TACCGATTTA
TTAAACCTGC TAATGGTGCA GGAACTCGCC GTAAAAGAAC GTAGCGCGAT CAATCATTTG
CTGCTCAGCG ACTCATTCAA TCTGAATGAT TACCGCACCA TAGGCTCCTT CATGTATGAA
TATGGCCGAG CTGTGATGCA CGCGAGCAAT GCAGCGATTT CCGATAGAAA ATCGTTACTG
CAAAACCTAC AAGATTCGCC AGAGAATCAA CGTATTCTGC AGATAAGCCA ACAAATTGAG
CAGCAAACCC GCATTAGCGC ACTGGCACAG AATATTAATG CCAACTTAGG TTACGGTGGC
TTAATGGGGA GTTTTCAGGA CTATCTGCTG AAGGGCGATG ACGTTTCACT ACAAAAATTT
AATAGCGCGC TGGCGACGAT TCATCTCAAC TTAGATGAAC TCAATCACGA GACCCGCTTT
CTCCCCAAAT TTAAGCCGGC GCTGAAAACC ATTGAGGACA GCATAGATCA ATACCAGTTC
AGTATGGCCA AGCTGCTGCA ATTGAAGCAG CAAGGCTTGC CGATGGCGGA GATCAACGCC
ATCGCGCAAG TCCCAGCCAG TGAGGACAAG TTAAGCCAAG CGATGACACA GCTGTTAATG
CCGCCACATC CGATTGACAG CCAAAAATGG TGGGCGCTCA CCACCCAGCG TATTGAACAA
CTGCATCAAC TCGCCAAAGA CATCACCCAG ACCATGGCGC AACAGAGCGA GTTTCAACAA
AACCAAGCCC TGACCTTCCT CGGCCTGTAC TTGTTATCAG CCCTGTTCAC CGCAACCGTT
ACACTCTGGC TCGGACAGAA AATCATTCGC AACTTTATGG ATAAAATCAC TAAGATTGCT
AATGACATGC AACAAATGGC GGAAGATCCC AAGCTCAATA TCAATATCCG CGTCTCAGGT
ACTGATGAAC TCGCTCGCAT GGCCCGCGCC ATGAACCGGA TGATCAGCGA ACGGCAGAAG
GCGAACCATG CACTCACCCG CGCCGCTGCG GTATTTGACT ATTCTGCCGA GGGCATAATG
GTGACTGATG CCGACAACCA TATCGAACTG GTCAATCCGG CTTTCTGCAA TATTACTGGC
TATACATTGG AAGAAGTGAA AGGCCGCAGT CCATCCATCC TCAGTTCTAG CCGTCATTCG
CAGCACTTTT ACACCACCAT GTGGGAGTCG CTGCAAACGG AAGGAAAATG GGAGGGCGAG
GTTTGGAATA AGCGCAAAAA TGGCCAAGTG TATCCCGAGT ATCTAGCCAT TACTGTGGTG
CGAAATGAGC AAGGACAAAT AATCCAACAC ATTGGTTTAT TTATGGATAT CAGTAAACGT
AAACAATATG AGCAAGATCT TTGGTATCAA GCCAACTTCG ATGCGTTAAC GGGGCTGCCT
AATCGTAAGT TGTTTAATGA GCGCCTGCAG CACGAAATCC ATGTGGCGCA GCATGACTCA
CGCAAACTGG CGATTCTGCT GATTGACTTA GACCAATTCA AATACATCAA CGATGTGCAA
GGCCACGCCA CGGGCGACTT ATTACTTAAA GATGTGGCCA AACGCTTAGA AGGCATTGCG
GGGAAAACCG ACTTTATCGC CCGCATCGGG GGCGATGAGT TTGTACTTAT TTTGCCGCGA
CTGACAAACG AACTCGCCAT CGAACACATG GCAACGCGTA TTATCGAAAC CTTAGGCATG
CCGTTTGACT TAAATGACCG CGAGATCCAG ATTTCAGCCA GCTTTGGTAT CGGCGTCTAT
CCCGAAGATG GCCTCGATGT CAGCTCACTC ACCCGCAATA CCGAAACCGC CATGTATCAA
GCCAAAGATG CGGGACGGAA CAATTTCAAA TACTTTACCA CGGGCATGAA TGAAGCCATG
TTCGCTCGGA TGGAGTTAGA GCAACGCCTG CGCCGCGCCG TGGCACAAAA TGAATTTGCC
CTGCATTATC AACCCATAGT GGATATGCAA ACTGGAGTGG TCTGCAGCGT CGAAGCCCTT
ATCCGCTGGC AAGACCCCGA CTTTGGCCTG ATCCCACCGG ATCAATTTAT CCCGCTGGCC
GAAGAAACCG GACTGATAGA GCCTATGGGC GAATGGGTGC TCAACCAAGC CATGCATGAT
TTGAGGCAGT GGCAGAAAAG TGGCCTAAAA ATCAATGTCG CGATTAATGT TTCCAGTCGC
CAATGTATCA ACACCCGCGG CATGGGATTC GACCAAGTGC TGCAGGAATG CTTTAACCGC
CACCATGTGA ACCCGCGCAA TGTGCATATT GAGATCACAG AAAGTATGCT GATGGGCGAT
GCCAGCCACT GCTTGAGCAC GCTCGAATCG ATTCGCCATT TAGGCTCACA AATCTATATC
GATGACTTTG GTACGGGTTA TTCTTCCCTG AGTTATTTGA AAAAATTCCC GATTTCAGTG
ATTAAAATCG ATCGTAGCTT TGTGGAAAAT GCCCTCGAAA GTAACGCTAA TGCTAACTTA
GTCAAAGCTA TCGTCATGAT GGGGCAAAGT CTCGAAATGG AGTTAGTGGC CGAAGGCATA
GAAACCGAGG CCCAATGGCA CTTCCTGCGG GATCTAGGTT GCCACTTTGC CCAAGGATAT
TTGATCTCTA AACCACTGCC CTTCGACGAG ATCACGCCCT TGCTGCACAT CAAGCACACA
GCACTGCTCA ATCATGATTA CCAAGATAGT TGTGTGAATA TCTAA
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| Protein sequence | MSSALHHLSL KQKLILFSLV PLLMMSFFIL TRMHGLINES HSAKHNHLAV QTTVQITELL
YQLQNEYGLS TNQLPADNAL LAQQQATSNA FNTLLNSEPL AHLSEALDPK SIEASQMNAL
LDAITLTGHR LANARQTLAS ETQSPLTDLY SQLHTQLLQL IQLLQLQTSE ISQSRAYTDL
LNLLMVQELA VKERSAINHL LLSDSFNLND YRTIGSFMYE YGRAVMHASN AAISDRKSLL
QNLQDSPENQ RILQISQQIE QQTRISALAQ NINANLGYGG LMGSFQDYLL KGDDVSLQKF
NSALATIHLN LDELNHETRF LPKFKPALKT IEDSIDQYQF SMAKLLQLKQ QGLPMAEINA
IAQVPASEDK LSQAMTQLLM PPHPIDSQKW WALTTQRIEQ LHQLAKDITQ TMAQQSEFQQ
NQALTFLGLY LLSALFTATV TLWLGQKIIR NFMDKITKIA NDMQQMAEDP KLNINIRVSG
TDELARMARA MNRMISERQK ANHALTRAAA VFDYSAEGIM VTDADNHIEL VNPAFCNITG
YTLEEVKGRS PSILSSSRHS QHFYTTMWES LQTEGKWEGE VWNKRKNGQV YPEYLAITVV
RNEQGQIIQH IGLFMDISKR KQYEQDLWYQ ANFDALTGLP NRKLFNERLQ HEIHVAQHDS
RKLAILLIDL DQFKYINDVQ GHATGDLLLK DVAKRLEGIA GKTDFIARIG GDEFVLILPR
LTNELAIEHM ATRIIETLGM PFDLNDREIQ ISASFGIGVY PEDGLDVSSL TRNTETAMYQ
AKDAGRNNFK YFTTGMNEAM FARMELEQRL RRAVAQNEFA LHYQPIVDMQ TGVVCSVEAL
IRWQDPDFGL IPPDQFIPLA EETGLIEPMG EWVLNQAMHD LRQWQKSGLK INVAINVSSR
QCINTRGMGF DQVLQECFNR HHVNPRNVHI EITESMLMGD ASHCLSTLES IRHLGSQIYI
DDFGTGYSSL SYLKKFPISV IKIDRSFVEN ALESNANANL VKAIVMMGQS LEMELVAEGI
ETEAQWHFLR DLGCHFAQGY LISKPLPFDE ITPLLHIKHT ALLNHDYQDS CVNI
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