Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0122 |
Symbol | |
ID | 5751819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 143437 |
End bp | 144702 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286368 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001552564 |
Protein GI | 160873248 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCAGG AAATAAGACT CGAAATTTCG GCATGGTTAG CGGGCTTTGG GATTGATAGC CAACCCTCGG ACGGCATATC AACCAGCATA ATGATCATTG CCTGCCTACT GCTTGCAGGC ATCGCTTATT TCATTGTTCG ACGCGTAGTC ATACGTGCGG TCAACATGGT GATCCTCCGC TCCAAAGTCA CTTGGGACGA TGTGTTCATG CGTTACAAGG TGCTTGAAAA GCTGGCCATG CTAGTGCCTG CAATCGTGCT CAATCTATTA GTGCCCATCG CCTTAACCGA ACATCAAATC TTAAGTAATT TAGTCGATCG GCTGCTGAGT ATTTGGCTGG TGGTGCTGAT GATCCGCGCT ATTTATGCGG GTTTAGATGC GGTCGACGAA ATTTCAGATG TGAATCTGGT GAGCCGGCGT TTACCCGTTA AAAGCTTTGT GCAGTTAACT AAGCTGTTTT TATTCTTTGT CGGTATTATC GTTTCTATCT CCATCTTGGC CGATCAGTCG CCTGTGTACT TCCTTAGCGG CTTAGGTGTG GCGACGGGTT TTGTGATGTT AGTGTTCCGC GACACTATCT TAGGTTTCGT GGCGGGCATT CAGTTAGCGG CTAACCGTAT GGTGAGCAAG GGCGACTGGA TCCAGATGGA CAAATACGGC GCCGACGGTG CGGTAGAAGA AGTCTCGCTG ACCACGGTCA AAGTGCGCAA CTGGGACAAA ACCATCACTA TGATCCCAGC CTATGCCTTA GTGTCGGATG CGTTTCGTAA CTGGCGGGGC ATGTCTGAGT CGGGTGGTCG TAGGATCAAA CGCGCCATCA ATATCGATAT CAACAGTATT AAGTTTTTGA GCGAGGAAGA GCGCGAGCGT CTGAGTAAGA TCAATTGCTT AAAAGAATAT TTCCCCGCGA AGATCAACGA AATCCGTGAG TCGAATGCCA GAGTGTCTGA CCTCGACATG AAAGTGAACG GTCGCCATTT GACCAATGTC GGCACCTTCC GTGCTTACCT GCAGGAATAC CTACAGCGTC ACGATAAAAT CCATAAGGAA ATGACCTTAA TGGTGCGCCA ATTAGCGCCG ACCACTGAGG GATTGCCGAT CGAGGTTTAT ATCTTCACCA ACGATACCCG CTGGGCATTT TATGAGGCGA TACAAGCGGA TATCTTCGAC CATATTTTTG CGATATTGCC TGAGTTTGGT CTGCAGGCAT TCCAAGCGCC AACGGGCAAC GATATTCGTA GCTTAAAGTC GGTTAAGGTT GACTAG
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Protein sequence | MDQEIRLEIS AWLAGFGIDS QPSDGISTSI MIIACLLLAG IAYFIVRRVV IRAVNMVILR SKVTWDDVFM RYKVLEKLAM LVPAIVLNLL VPIALTEHQI LSNLVDRLLS IWLVVLMIRA IYAGLDAVDE ISDVNLVSRR LPVKSFVQLT KLFLFFVGII VSISILADQS PVYFLSGLGV ATGFVMLVFR DTILGFVAGI QLAANRMVSK GDWIQMDKYG ADGAVEEVSL TTVKVRNWDK TITMIPAYAL VSDAFRNWRG MSESGGRRIK RAINIDINSI KFLSEEERER LSKINCLKEY FPAKINEIRE SNARVSDLDM KVNGRHLTNV GTFRAYLQEY LQRHDKIHKE MTLMVRQLAP TTEGLPIEVY IFTNDTRWAF YEAIQADIFD HIFAILPEFG LQAFQAPTGN DIRSLKSVKV D
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