Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0109 |
Symbol | |
ID | 5751805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 130431 |
End bp | 131861 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641286354 |
Product | selenocysteine synthase |
Protein accession | YP_001552551 |
Protein GI | 160873235 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACAGA TGATGACCCA AGCACCCGAA ACGCCACAAG CCTTGTACCG CGCTTTGCCC TCAATGGACA GCTTACTGGC GGAGCCTAGC TTTGTGGTAT TGCAGCAGTC TTACGGCAAA GTGGCAGTAA AGACGGCGCT GGATAGCCAG TTAAAGGCGG CGCGAAGCTT AATTAGCAGT GAGCGCCGTT TGCCGACATG GTGTGGCGAG CTTGCGCAAT TGCACGGATG TTTGGTTGAT CAACTGTCTA AAGATTACAG CCACAGCTTA ATACCTGTGT GGAATCTTAC TGGCACCATA CTGCATACCA ACCTTGGCCG AGCGCAGCAG TCAGAAGCGG CAATTCGAGC CGTGACTTCT GTTATGCGCT ACCCCACACC GCTGGAGTTT GAGCTTGCGG CAGGTGAACG TGGTCACAGG GATAATGCAA TCAGTGCTTT AATCCAGCGC TTAACGGGTG CCGAGGCTTG TTGTGTCGTG AATAACAATG CCGCAGCTGT GTTGTTGATG CTGTCAGCTG TGGCTGCGGG GAAAGAAGTC ATAGTCTCCC GTGGTGAGTT GGTGGAAATT GGCGGCGCGT TTCGCATCCC TGACATTATG CGCCAAGCGG GCTGCACCTT AGTCGAGGTC GGCAGCACCA ATCGGACTCA CCTTAAGGAT TATGAGCAGG CGATTACTGA AAATACCGCT GCAATAATGA AGGTCCACAC CAGTAATTAT CATATTAGTG GTTTTACTGC CGCAGTGGAG GAGGCAAGGC TGGGTCAGTT ATGCCGTGAG CGTGGCATAT CACTCATTTC GGATCTTGGT AGTGGCTCAC TGACGGACTT GCGCCGCTTT GGCCTAAAAC AAGAACCTAC GCCCCAAGCC ATGCTGGCTG ATGGGGTCGA TTTAGTGAGT TTTTCTGGCG ACAAATTATT GGGCGGTCCT CAATCGGGTT TAATTGTCGG CAAACAGTCG CTGATTAAGC AGTTACAGAG TCATCCACTA AAGCGGGCCC TACGTTGCGA TAAGCTGATT TTGGCGGCGT TAGAGGCAAC ATTGATCCAC TATCTTAACC CTGAAACCTT AGACTCTGAG CTGCCCATTA TGGCGAAATT TGCCCGTAGC CAAGAGACGT TATGGCAGAT TGGTCATCGC TTACAGCAAG CTTTGGTTCC ACACTTTGAA CCTTGTTATC GTATTGAGTT AATTGAGTGC CAAACACAGG TCGGCAGTGG CTCGCAGCCC GATACTTTTT TACCCTCAGT GGCGCTGTGT TTTATCGCAC TCGATGGCGG CAGTTTAAGT TTGTTAGAAC AAAAATTTAA GCAGGCGGCA CGCCCTATCA TAGGTCGCAT GAGTAACGAT CAACTCAGAT TGGATTTACG CGGTCTTGAT AGCGAAGCCG AGCTACTCGC CGAGCTGAGC ATATTAGGTG TGCAGTTGTG A
|
Protein sequence | MTQMMTQAPE TPQALYRALP SMDSLLAEPS FVVLQQSYGK VAVKTALDSQ LKAARSLISS ERRLPTWCGE LAQLHGCLVD QLSKDYSHSL IPVWNLTGTI LHTNLGRAQQ SEAAIRAVTS VMRYPTPLEF ELAAGERGHR DNAISALIQR LTGAEACCVV NNNAAAVLLM LSAVAAGKEV IVSRGELVEI GGAFRIPDIM RQAGCTLVEV GSTNRTHLKD YEQAITENTA AIMKVHTSNY HISGFTAAVE EARLGQLCRE RGISLISDLG SGSLTDLRRF GLKQEPTPQA MLADGVDLVS FSGDKLLGGP QSGLIVGKQS LIKQLQSHPL KRALRCDKLI LAALEATLIH YLNPETLDSE LPIMAKFARS QETLWQIGHR LQQALVPHFE PCYRIELIEC QTQVGSGSQP DTFLPSVALC FIALDGGSLS LLEQKFKQAA RPIIGRMSND QLRLDLRGLD SEAELLAELS ILGVQL
|
| |