| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0105 |
|---|
| Symbol | |
|---|
| ID | 5751801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 125501 |
|---|
| End bp | 127885 |
|---|
| Gene Length | 2385 bp |
|---|
| Protein Length | 794 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641286350 |
|---|
| Product | formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_001552547 |
|---|
| Protein GI | 160873231 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACC ACTGGATCGA TATTAAAAAT TCTAATTTGA TCATTATCAT GGGCGGTAAT
GCTGCAGAGG CTCACCCTGT CGGATTCGGC TGGGTTACAG AAGCAATGCA ACATAACAAC
GCTAAACTTT TGGTGGTCGA TCCTCGCTTC ACCCGTAGCG CCGCTGTGGC CGATTATTAT
GCGCCGATCC GTTCGGGCAC AGATATCGCC TTCCTGCTCG GGGTGATCCG CTATCTTATT
GAAACCAAAC AAGTGAACTA CGACTATGTG AAGGCTTATA CCAATGCCAG TTACATAGTG
CGCGAAGACT TCTCTTTTAG TGAAGGTCTG TTCAGTGGTT TCGATGAAGA AACAGATAGC
TACGATAAAG AGTCTTGGTA CTACGAGTTA GACGAACAGG GTTACGCGAA AGTCGATCCT
AGCTTCGAGC ATCCACGCTG CGTGTGGAAC TTAATGAAGC AGCATGTAGA TCGCTATGAC
TTTGAAACAG TAAGCAATAT TACCGGTACG CCGATTCCGG ACTATGAGAT GGTTTGCCAG
CAAATTGGCA GCACTCATAC CCACGATAGA GCCGCCACTT TTATGTATGC CTTAGGTTGG
ACTCACCATA CTAAAGGGGC GCAGAACATT CGCTCTATGG CTATGGTGCA GTTGCTGCTG
GGTAACATTG GGGTGTTGGG CGGTGGCGTT AACGCACTGC GTGGTCACTC TAACGTGCAA
GGCGCGACTG ATATGGGTTT ATTGTGCCAA AGCTTGCCTG GTTACTTGAA GTTACCGAGT
GAAAAAGACA CTGATCTTAA GACCTATCTC GATCGTTACA CGCCTGTCGC CTTGCGTCCG
GGTCAAACCA ACTATTGGCA AAATTATCCT AAATTCTTTA TTTCACAAAT GAAGAGCTTC
TGGGGCGATA ACGCCACGGT TGAAAACGAC TTTGGTTATG ACTGGGTGCC TAAGTGGGAT
AAACAGTACG ACTTTACTAA GCACTTAGAC ATGGCTTTCC ACGGTGAAGT GAATGGCTAC
ATTATCCAAG GTGTTAACGC CATTAATTCT ATGCCGAACC GCAATAAGGT ACTCAAAGCC
TTGAGTAATC TTAAGTACAT GGTGGTGCTG GATGCCTTGG CAACGGAAAC CGCAACCTTC
TGGCAAAATG CCGATGGCTT CAACGAGGTG AATCCCGCTG AAATCATGAC TGAAGTGTTC
CGCTTACCGA CGACGTGTTT TGCCGAAGAA GAAGGTTCCA TCGTCAACTC TGGACGTTGG
ATGCAGTGGC ATTGGAAGGG CGCTAACCCG CCGGGTGAAG CCAAGCCAGA TGCTGAGATC
CTCTCCGGTG TCTTAATGGC CATGCGTGAA CTGTATAAGC AAGAGGGTGG TAAATTGCCT
GAGCCAGTGC AAGCGATAAG TTGGGATTAC CACAATCCTT ACTCGCCGCA TGCCGAAGAA
GTTGCTCGTG AGCTTAACGG TAAGGATCTC GTTACTCAGC GTCAGCTCAG TAGCTTCTCT
GAACTCAAAG CTGATGGTAG TACTGCTAGC GCCTGTTGGA TTTATGCAGG TTCTTGGACC
GAAGAGGGCA ACCTGATGGC TCGCCGCGAC AACCATGATC CTTCGGGTAA AGGTGTCACT
CCGGGCTGGG CATTTGCTTG GCCAGCCAAC CGTCGCGTGC TGTATAACCG CGCTTCTTGC
GATATCAACG GCAAACCTTG GGATCCTAAA CGTACTATCG TCGAGTGGGT TGATGGTAAG
TGGCATGGTA TCGATGTGGG CGACTTCAAT ATGAAGTTAA CACCACAGGA ATCCGCAGGT
CCCTTCATCA TGCAACCCGA AGGTGTGGGT CGTTTCTTTG CCCTTAAGTT GTTGGCCGAA
GGTCCGTTCC CTGAGCACTA CGAGCCGATG GAGTCGCCTA TTGGGTTGAA CCCGTTACAC
AAGGTCACCA GTAACCCTGC GGTACGTATG TTACCGGGTG TGAAGGAAAC CTTAGGTTCC
CATAAGGACT TCCCTTATGT GGCAACTACT TACTGTGTAA CTGAACACTT TAACTTCTGG
TCTACGCATG CTCGTTTAGC TGCGATTTCT ATGCCTGAAA CCTTCGTCGA AATCGATGAA
ATGTTAGCGG CAGAAAAAGG TATCGCCAAT GGGGATTGGG TCACTGTCAG CTCTAAACGC
GGCAGCATTG AAACCAAAGC CTTAGTGACT AAACGGCTAC AGCCGTTAAA GGTAAATGGC
CAGTTAGTCC ATACCGTCGG GTTACCCCGT CACGGCAGCC ATAATGCACT CACTCGTAAG
AGTTACTCCT GTAACGTACT CACCACGGAA GTGGGGGATG CAAATACACA GGTGCCTGAG
TTCAAAGCAT TTTTGGTTAA CATCACTAAA GCGGAGGGGA TCTGA
|
|---|
| Protein sequence | MTNHWIDIKN SNLIIIMGGN AAEAHPVGFG WVTEAMQHNN AKLLVVDPRF TRSAAVADYY
APIRSGTDIA FLLGVIRYLI ETKQVNYDYV KAYTNASYIV REDFSFSEGL FSGFDEETDS
YDKESWYYEL DEQGYAKVDP SFEHPRCVWN LMKQHVDRYD FETVSNITGT PIPDYEMVCQ
QIGSTHTHDR AATFMYALGW THHTKGAQNI RSMAMVQLLL GNIGVLGGGV NALRGHSNVQ
GATDMGLLCQ SLPGYLKLPS EKDTDLKTYL DRYTPVALRP GQTNYWQNYP KFFISQMKSF
WGDNATVEND FGYDWVPKWD KQYDFTKHLD MAFHGEVNGY IIQGVNAINS MPNRNKVLKA
LSNLKYMVVL DALATETATF WQNADGFNEV NPAEIMTEVF RLPTTCFAEE EGSIVNSGRW
MQWHWKGANP PGEAKPDAEI LSGVLMAMRE LYKQEGGKLP EPVQAISWDY HNPYSPHAEE
VARELNGKDL VTQRQLSSFS ELKADGSTAS ACWIYAGSWT EEGNLMARRD NHDPSGKGVT
PGWAFAWPAN RRVLYNRASC DINGKPWDPK RTIVEWVDGK WHGIDVGDFN MKLTPQESAG
PFIMQPEGVG RFFALKLLAE GPFPEHYEPM ESPIGLNPLH KVTSNPAVRM LPGVKETLGS
HKDFPYVATT YCVTEHFNFW STHARLAAIS MPETFVEIDE MLAAEKGIAN GDWVTVSSKR
GSIETKALVT KRLQPLKVNG QLVHTVGLPR HGSHNALTRK SYSCNVLTTE VGDANTQVPE
FKAFLVNITK AEGI
|
|---|
| |