Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0101 |
Symbol | |
ID | 5751797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 120035 |
End bp | 120742 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641286346 |
Product | histidine utilization repressor |
Protein accession | YP_001552543 |
Protein GI | 160873227 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCTATTC CTAAGTTTGC AGAAATTAAG CAATACATTA TCTCCTCTAT CGAATCTGGC GAGTGGGAAG AAAACGCCCG CGTGCCTTCC GAGAATCAGC TGGCCGACTT GTTTACCTGC AGCCGAATGA CGGCGCGACG TGCGTTAACC GAGCTTACGG ATAGCGGCGT ACTCGAACGC TCCCAAGGGC TTGGCACCTT TGTGGCTGGG CGAAAATCCC AGTCATCTAT GTTGGCGATT CGCAATATTG CCGATGAGAT TAAAGACCGC GGCCACGGCT ATAGCGTACA GCAATGGGTG CTAGAACAAA CAGTTGCCAG CACGACTATT GCAATTTCCC TTGGGCTTGA GCGCGGTGCG ACGGTATTTC ATTCGATCTT AGTGCATTGC GAGCAGGGTT TACCGCTGCA AGTCGAGGAG CGTTACGTGA ATCCCGAGTT AGTGCCCGAT TATTTATTGC AGGATTTTAC CCAGCAGACA CCCCACGAAT ATTTGTCCCA AGTGGCACCG CTGACCGAGG CGCATCACAC GATTGAAGCG ATTATCGCCA GCGCCGAATT ACAGCAAAGG CTCGAGATCC CCGCGACTGA GCCCTGTTTA CAGATTTTAC GCCGCACTTG GTCACGCCAA GGCGTGGTGA GTTTTGCCAA GTTAGTTCAC CCCGGTAGCC GCTTTAAACT CGGCGGCCAC TTAACTTTTA GCAAGTAG
|
Protein sequence | MAIPKFAEIK QYIISSIESG EWEENARVPS ENQLADLFTC SRMTARRALT ELTDSGVLER SQGLGTFVAG RKSQSSMLAI RNIADEIKDR GHGYSVQQWV LEQTVASTTI AISLGLERGA TVFHSILVHC EQGLPLQVEE RYVNPELVPD YLLQDFTQQT PHEYLSQVAP LTEAHHTIEA IIASAELQQR LEIPATEPCL QILRRTWSRQ GVVSFAKLVH PGSRFKLGGH LTFSK
|
| |