| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0063 |
|---|
| Symbol | |
|---|
| ID | 5751759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 72818 |
|---|
| End bp | 73312 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286308 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001552505 |
|---|
| Protein GI | 160873189 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.694655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00200651 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCTG CCTGCAATGA GTTTGAAGCT ATGAAACGAT TACTGATAGT TATCTTAGCC
TTAGGCCTTG GCGCTTGTGC TAGCGCGCCA GAACCTAAGC CTGTGGTAAA GCAAGTTGAA
CCCGCCACGG TTTGGAACGA TAGCAATATC TCCGAACTGC ATTCTGAGTG GCGCGGTGTG
CCCTATCGTT TAGGCGGTGG CACTAAGCGG GGCATAGATT GCTCGGCCTT TGTGTCGGTC
GCCTATCAGA AGATGTTGGG TATGACGCTG CCGCGCACGG TTGAAGAACA GCAAGCCCTA
GGGAAACCTG TGCCGAGAAA TCAACTGCGC AAGGGCGACT TAGTATTTTT CAAGACAGGT
TGGAGCACAC ACCATGTCGG CATTTATGTG GGAGACGATA ATTTTCTCCA TGTTTCCACT
AGCCAAGGGG TGAAGATTTC GAGCCTGCAT AACAGTTATT GGGCGTCTAA GTATTGGAAT
GCACGGCGAA TTTAG
|
|---|
| Protein sequence | MKSACNEFEA MKRLLIVILA LGLGACASAP EPKPVVKQVE PATVWNDSNI SELHSEWRGV
PYRLGGGTKR GIDCSAFVSV AYQKMLGMTL PRTVEEQQAL GKPVPRNQLR KGDLVFFKTG
WSTHHVGIYV GDDNFLHVST SQGVKISSLH NSYWASKYWN ARRI
|
|---|
| |