Gene Sbal195_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0061 
Symbol 
ID5751757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp70595 
End bp71839 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content49% 
IMG OID641286306 
Productmajor facilitator transporter 
Protein accessionYP_001552503 
Protein GI160873187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00890] Oxalate/Formate Antiporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0161323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000519908 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAAAG AGATGAACCG TACTCGGTAC CTGACCTTAG TTGGTACTAT TATCACCCAG 
TTTGCACTCG GCTCAGTTTA CACTTGGAGC CTGTTCAATG CGCAGTTGGC CGCTAAGCTT
GACGAGCCTG TCAGCCAAGT GGCGTTTGTA TTTGGTTTAC TGAGTTTGTC TTTGGCCGTG
GCATCTTCCA TGGCGGGCAA ATTACAGGAA CGCTTCGGCG TGCGTAATGT CACCTTAGGC
GCAGGCCTAT TACTCGGGCT GGGATTCTTA CTCACAGCCC AAGCCAGTAA CTTAATGATG
CTTTACCTGT GTGCCGGGAT TTTAGTGGGC TTTGCCGATG GCACTGGCTA CTTGATGACT
TTATCTAACT GCGTGAAGTG GTTCCCCGAA CGCAAAGGGT TGATTTCGGC GTTAGCGATT
GGCGCTTATG GTCTAGGTAG CCTTGGATTT AAGTACATCA ACGTGCTGTT ACTCGAAAAT
ACTGGCCTTG AAACTACCTT CCAACTGTGG GGCTTAATCG CCATGGCGCT GGTGTTGTGT
GGCGGCATGT TGATGAAAGA TGCACCTGCA CAATCAGCCG CAAGTCAGCA AGCCGAAAGC
CGCGACTTCA CCCTCGCTGA AGCCATGCGT AAACCACAAT ACTGGATGCT GGCGCTGATG
TTCCTGTCTG CCTGTATGAG TGGTTTGTAT GTGATTGGTG TAGCGAAAGA TATCGGCGAG
AAGATGGTCG ACTTGCCAGT ACTTGTCGCC GCCAATGCGG TTGCGGTAAT TGCCATGGCG
AACCTTAGTG GTCGTTTGGT ACTGGGTATC CTGTCGGACA AAATCCCTCG CATTCGGGTT
ATTTCGCTGG CGCAGATCAT CACCTTAGTC GGTATGGTGT TACTACTGTT TGTACCTTTG
AATGCTAACC TGTTCTTCGT CGCCGTTGCC TGCGTTGCCT TTAGTTTTGG TGGCACTATT
ACTGTTTATC CATCACTGGT GAGCGACTTC TTCGGCCTGA ATAATCTGAC TAAAAACTAT
GGGGTTATCT ACTTAGGTTT TGGTGTCGGC AGTATTATCG GTTCGATTGT CGCCTCGTTA
TTTGGTGGCT TTATTGCGAC CTTCAACGTG ATTTTAGTGC TGCTGGTGGT GGCGTTAGTG
ATGTCATTAA CCATACGTAT GCCAGAGCCT AAAACCCCAG TGTCAGCCAA GAAAGCGACT
AAGAGTACAC CGCGCTTAGT GAACATGACG GCAGAATCGG CGTAA
 
Protein sequence
MTKEMNRTRY LTLVGTIITQ FALGSVYTWS LFNAQLAAKL DEPVSQVAFV FGLLSLSLAV 
ASSMAGKLQE RFGVRNVTLG AGLLLGLGFL LTAQASNLMM LYLCAGILVG FADGTGYLMT
LSNCVKWFPE RKGLISALAI GAYGLGSLGF KYINVLLLEN TGLETTFQLW GLIAMALVLC
GGMLMKDAPA QSAASQQAES RDFTLAEAMR KPQYWMLALM FLSACMSGLY VIGVAKDIGE
KMVDLPVLVA ANAVAVIAMA NLSGRLVLGI LSDKIPRIRV ISLAQIITLV GMVLLLFVPL
NANLFFVAVA CVAFSFGGTI TVYPSLVSDF FGLNNLTKNY GVIYLGFGVG SIIGSIVASL
FGGFIATFNV ILVLLVVALV MSLTIRMPEP KTPVSAKKAT KSTPRLVNMT AESA