Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0061 |
Symbol | |
ID | 5751757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 70595 |
End bp | 71839 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286306 |
Product | major facilitator transporter |
Protein accession | YP_001552503 |
Protein GI | 160873187 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0161323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000519908 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAAG AGATGAACCG TACTCGGTAC CTGACCTTAG TTGGTACTAT TATCACCCAG TTTGCACTCG GCTCAGTTTA CACTTGGAGC CTGTTCAATG CGCAGTTGGC CGCTAAGCTT GACGAGCCTG TCAGCCAAGT GGCGTTTGTA TTTGGTTTAC TGAGTTTGTC TTTGGCCGTG GCATCTTCCA TGGCGGGCAA ATTACAGGAA CGCTTCGGCG TGCGTAATGT CACCTTAGGC GCAGGCCTAT TACTCGGGCT GGGATTCTTA CTCACAGCCC AAGCCAGTAA CTTAATGATG CTTTACCTGT GTGCCGGGAT TTTAGTGGGC TTTGCCGATG GCACTGGCTA CTTGATGACT TTATCTAACT GCGTGAAGTG GTTCCCCGAA CGCAAAGGGT TGATTTCGGC GTTAGCGATT GGCGCTTATG GTCTAGGTAG CCTTGGATTT AAGTACATCA ACGTGCTGTT ACTCGAAAAT ACTGGCCTTG AAACTACCTT CCAACTGTGG GGCTTAATCG CCATGGCGCT GGTGTTGTGT GGCGGCATGT TGATGAAAGA TGCACCTGCA CAATCAGCCG CAAGTCAGCA AGCCGAAAGC CGCGACTTCA CCCTCGCTGA AGCCATGCGT AAACCACAAT ACTGGATGCT GGCGCTGATG TTCCTGTCTG CCTGTATGAG TGGTTTGTAT GTGATTGGTG TAGCGAAAGA TATCGGCGAG AAGATGGTCG ACTTGCCAGT ACTTGTCGCC GCCAATGCGG TTGCGGTAAT TGCCATGGCG AACCTTAGTG GTCGTTTGGT ACTGGGTATC CTGTCGGACA AAATCCCTCG CATTCGGGTT ATTTCGCTGG CGCAGATCAT CACCTTAGTC GGTATGGTGT TACTACTGTT TGTACCTTTG AATGCTAACC TGTTCTTCGT CGCCGTTGCC TGCGTTGCCT TTAGTTTTGG TGGCACTATT ACTGTTTATC CATCACTGGT GAGCGACTTC TTCGGCCTGA ATAATCTGAC TAAAAACTAT GGGGTTATCT ACTTAGGTTT TGGTGTCGGC AGTATTATCG GTTCGATTGT CGCCTCGTTA TTTGGTGGCT TTATTGCGAC CTTCAACGTG ATTTTAGTGC TGCTGGTGGT GGCGTTAGTG ATGTCATTAA CCATACGTAT GCCAGAGCCT AAAACCCCAG TGTCAGCCAA GAAAGCGACT AAGAGTACAC CGCGCTTAGT GAACATGACG GCAGAATCGG CGTAA
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Protein sequence | MTKEMNRTRY LTLVGTIITQ FALGSVYTWS LFNAQLAAKL DEPVSQVAFV FGLLSLSLAV ASSMAGKLQE RFGVRNVTLG AGLLLGLGFL LTAQASNLMM LYLCAGILVG FADGTGYLMT LSNCVKWFPE RKGLISALAI GAYGLGSLGF KYINVLLLEN TGLETTFQLW GLIAMALVLC GGMLMKDAPA QSAASQQAES RDFTLAEAMR KPQYWMLALM FLSACMSGLY VIGVAKDIGE KMVDLPVLVA ANAVAVIAMA NLSGRLVLGI LSDKIPRIRV ISLAQIITLV GMVLLLFVPL NANLFFVAVA CVAFSFGGTI TVYPSLVSDF FGLNNLTKNY GVIYLGFGVG SIIGSIVASL FGGFIATFNV ILVLLVVALV MSLTIRMPEP KTPVSAKKAT KSTPRLVNMT AESA
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