| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0037 |
|---|
| Symbol | |
|---|
| ID | 5751729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 40886 |
|---|
| End bp | 41857 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286278 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001552479 |
|---|
| Protein GI | 160873163 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.430398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000152839 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAG CGGCAAAATT TTACGAAATG GACAATGAGC AAACCAATAA TAAGGATAAC
AAGATGAGTG TGCCTGATGC TGCAGTGGTA AAAGCGTTTT TACTCGATTT ACAAAACCGA
ATTTGTGCCG GTTTACAGGC TCTGGATGGC CAAGCAACGT TTGCCGCCGA TTCATGGACC
CGCGCCGAAG GCGGTGGTGG CACGAGCCGA GTATTAACCC AAGGTGCAGT ATTCGAGCAA
GCTGGAGTTA ACTTTTCCCA TGTGACTGGC GCCGCTATGC CGGCGTCAGC TACGGCGCAT
CGCCCAGAAT TGGCGGGTCG CAGTTTTGAA GCTATGGGTG TGTCTTTAGT GATCCATCCT
AACAATCCGT ATATACCGAC AACTCACGCC AATGTGCGCT TCTTCATCGC CCAAAAAGAG
GGGGCCGATC CTGTGTGGTG GTTTGGCGGT GGTTTTGACT TAACACCTTA TTATCCATTT
GAGGAAGATG TGCGCGAGTG GCATCAAACA TCTAAGGATA TTTGTGCGCC TTTCGGGGAT
GAGGTTTATC CCAAATATAA GAAATGGTGC GATGAGTATT TCTTCCTGCC GCATCGTAAT
GAAACCCGCG GCGTAGGCGG ACTGTTTTTC GATGACTTGA ATCAAGCAGG ATTCGAGCAA
AGCTTTAGCT TTATGCAAGC CGTGGGTAAT GGCTTCTTAA CGGCTTATGC GCCGATTGTT
GAGCGTCGTA AGGATACTGA GTTCGGTGAG CGTGAGCGTC AGTTCCAACT CTATCGCCGT
GGTCGTTATG TTGAGTTCAA CTTAGTCTAC GACAGAGGCA CGCTGTTTGG TCTGCAGACA
GGTGGACGTA CCGAGTCTAT CTTAATGTCG ATGCCGCCAT TAGTGCGTTG GCAATATGCT
TATACACCAG AGGCGGGAAG CCCAGAGGCA GATTTGTACG ATAACTACCT CAAACCCCGC
GACTGGGTTT AG
|
|---|
| Protein sequence | MHEAAKFYEM DNEQTNNKDN KMSVPDAAVV KAFLLDLQNR ICAGLQALDG QATFAADSWT
RAEGGGGTSR VLTQGAVFEQ AGVNFSHVTG AAMPASATAH RPELAGRSFE AMGVSLVIHP
NNPYIPTTHA NVRFFIAQKE GADPVWWFGG GFDLTPYYPF EEDVREWHQT SKDICAPFGD
EVYPKYKKWC DEYFFLPHRN ETRGVGGLFF DDLNQAGFEQ SFSFMQAVGN GFLTAYAPIV
ERRKDTEFGE RERQFQLYRR GRYVEFNLVY DRGTLFGLQT GGRTESILMS MPPLVRWQYA
YTPEAGSPEA DLYDNYLKPR DWV
|
|---|
| |