| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0036 |
|---|
| Symbol | |
|---|
| ID | 5751728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 40357 |
|---|
| End bp | 40923 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641286277 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_001552478 |
|---|
| Protein GI | 160873162 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000121984 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGC TACACCCATC CGATATAAAA GACATCATTC TTCAAGGTGG CGTTATCGCT
TATCCAACCG AGGCAGTTTA TGGCCTAGGT TGCGACCCTG ATAACGACAC TGCTATTCTA
AAGTTATTGG CGGTAAAACA GCGCCCATGG CAAAAAGGAC TGATCTTAGT CGCCAGTGAT
TTTCAGCAGC TTTTAGCTTA TGTTGATGAA TCGCAATTAA CGGCTGAGCA GCTTGAATTT
GCATTTTCCA AGTGGCCAGG GCCTTTTACC TTTGTCATGC CAATCAAAGC ACAGGTTTCA
AAATACCTCT GTGGCGAATT TGACTCTATC GCAGTGCGAG TGTCGGCCCA TGCTGGGGTA
CAAGCCCTGT GCCGCGCGCT TAATAAACCT TTAGTGTCGA CCAGTGCTAA CCTTGCAGGT
GAAGATCCCG CATTAACTGC CGCTGAAATC CTCGCTGATT TTACCGGTAA AATCGATGCA
CTGGTATTAG GCGAACTCGG CGAACAACGT CAGCCCTCGA CCATTATCGA TGCACGAAGC
GGCAAAATTT TACGAAATGG ACAATGA
|
|---|
| Protein sequence | MLQLHPSDIK DIILQGGVIA YPTEAVYGLG CDPDNDTAIL KLLAVKQRPW QKGLILVASD
FQQLLAYVDE SQLTAEQLEF AFSKWPGPFT FVMPIKAQVS KYLCGEFDSI AVRVSAHAGV
QALCRALNKP LVSTSANLAG EDPALTAAEI LADFTGKIDA LVLGELGEQR QPSTIIDARS
GKILRNGQ
|
|---|
| |