Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0032 |
Symbol | |
ID | 5751724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 36841 |
End bp | 37971 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641286273 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001552474 |
Protein GI | 160873158 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00105156 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAATAC CCATGAAACG GTTAATTTTA CTCGCGTTAA TGACATTCAA TTGCACGTTT GTTGCCGCCG ATACCCTTAC GCTGAAAGCG GGGCATCCTG AGTCATATGT GGTGAAAAAG GGCGATACTC TTTGGGATAT CTCCGCAGCG TTTCTAAATG ATCCATGGAA ATGGCCACGT CTTTGGGATG TAAACCCACA GATTGCCAAT CCCCATCTTA TTTATCCTGG CGATCAACTC ACGCTCGTGT TTGTCGATGG TCAGCCTCGG CTTGTGCGCA ACGGCGATAT GGTCGACAGT GCTAAACCCC ATGTGAAGAA GAGTCCTGAA GGACGGATTA TTGCCAAGAG CAATGCCATT CCTGCCGTCG ACTTGGCTTT GATTGAACAG TATTTAGTGC AGAATCGCGT TGTCGCAACC GACTGGCTTG CCGAGCAACC TATGGTATTG GCAGGCGAAA GCCCATCGCG TCACCATATT GTGGGTGATG TGATTTATAT CGATGCTGAA CTGCCGATGA ATCAAAAGTA CGGTGTTTAC GAACGTGGTC GCGAGTTTTT CAATAAAGCG TCTGGCGAAG CGATAGGACA AGAAGCCATT TTAGCATCAA CTGGGCAAGT GGTGGAGTCT GGTAAGGTTT CAAAAATTAA GTTGTTAACC AGCTTTCGTG AAACTAAAGC GGGTTTCAGA GTCATGCCGA TGGAAAGTGA TTCCTTGATG TCAGCTTACT TTACGCCAAA ACCGGCAGAG TTAAAGACGC CAGCCGTCGT GCTTGCTATC GAATCAAAGA TGCGTGAAGC GGGTAAGTTA GATGTGGTGT ACTTAGATAA AGGCACCCAA GATGGGGTTG AGCCCGGAGT CGTGTTTTCT ATTTACCGTG ATGGTGAAGT CATCGTCATC AACAATGATG GTATGCCAGT GCCTGCCACT GAGCGCACCG CCTACGATAA CCTGATGGCA TCTGTCTCAT CGGATCGCGC TATTCAAATG CCAGATATCT ATCATGGTAA ATTGTTGGTT TTCAAAGTAT TCGACAAAGC GAGCTTGGGT TTGATTGTCT CCACCGAGCG GCCTGTGCGT GTCGACGATA AGTTAATTGC CCCTGAGTCT TTAGCCTTAA GAGGTCAGTA A
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Protein sequence | MEIPMKRLIL LALMTFNCTF VAADTLTLKA GHPESYVVKK GDTLWDISAA FLNDPWKWPR LWDVNPQIAN PHLIYPGDQL TLVFVDGQPR LVRNGDMVDS AKPHVKKSPE GRIIAKSNAI PAVDLALIEQ YLVQNRVVAT DWLAEQPMVL AGESPSRHHI VGDVIYIDAE LPMNQKYGVY ERGREFFNKA SGEAIGQEAI LASTGQVVES GKVSKIKLLT SFRETKAGFR VMPMESDSLM SAYFTPKPAE LKTPAVVLAI ESKMREAGKL DVVYLDKGTQ DGVEPGVVFS IYRDGEVIVI NNDGMPVPAT ERTAYDNLMA SVSSDRAIQM PDIYHGKLLV FKVFDKASLG LIVSTERPVR VDDKLIAPES LALRGQ
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