| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0027 |
|---|
| Symbol | |
|---|
| ID | 5751719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 31062 |
|---|
| End bp | 32504 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286268 |
|---|
| Product | TrkH family potassium uptake protein |
|---|
| Protein accession | YP_001552469 |
|---|
| Protein GI | 160873153 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0149541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACT TTAGACCACT ATTGTTTATT TTAGGGCTGT TTTTGTCCAT GCTGACAGCC
TTCATGTTGA TCCCACTGCT TCTCGCCGTG TTCAATGCCG AGGAAACCGT GGGCTCTTTC
ATGCTGTCGG CGTTAGTGAC AGGCATTAGT GCCAGCTTGT GTTTACACAA TGGCCAGAGC
AAGACTATTA ACCTCAATAT CCGTGATATG TTCCTGCTGA CAAGCTTGAC GTGGTTGATC
GTGAGCCTGT TTGCGGCCAT GCCCTTTACC TTATATCACG GGATTGGCTA TACCGACGCC
TTCTTTGAGA CTATGTCCGG CATCACGACC ACAGGTTCTA CTGTGCTCTC GGGGTTGGAT
ACCATGGATC ACAGCATTTT AATCTGGCGT TCTTTATTGC AGTGGCTAGG TGGGATTGGC
TTTATTGTGA TGGCGGTGGC CATTCTGCCC TTCTTGAACG TCGGTGGTAT GCGGCTGTTC
CGCACTGAAT CTTCGGATTG GAGCGATAAA GCCGTACCAC GTACCCAAAG CATGGCTAAG
TACTTATTCT TTATTTATAT TTTGCTGACT GTTGCCTGCT GCGTTGCTTA TCATCTGGCG
GGAATGACTT GGTTTCAAGC CATCAACCAT GCCATGACCA CCCTATCGAC CGGCGGCTAC
TCAACATCAG ATAGCTCAAT GGCCGCGTTT TCGCACTCGG CTCACTGGGT TGGCGTGTTC
TTTATGGCGG CGGGTGGCTT ACCGCTGCTT ATGTTTGTGC ACACCATACA GCAAAGGGAT
CTGCGCATTT GGAACGATGC TCAGGTCAAA GGCTTCTTGT TTTTCCTGAC CTTCGTGTCT
TGTTCTATTG GCTTTTGGCT GTGGCAAACC CGCGACATTG AACTCCTCGA TGCGCTGCGT
TTATCCAGCT TTAACGTAGT TTCTGTGGTG ACCACCACAG GTTATGGCTT AACGGATTAC
GGGGCTTGGG GCGCCTTTGC CAACATCGCC TTTATGTTCT TAATGTTTGT CGGTAGCTGC
TCTGGCTCAA CCTCGGGCGG GATTAAAATC TTCCGTTTTC AAATCGCTGG CGCCATTATG
CGTGAGCAGT TGAAACAGCA ATGTCATCCA AACGGAATCT TTAGGGAACG CTACAACAAT
CGCATCATCA GTGAAGATAT CGTGCGCTCG CTGATCACTT TCGTGCTGTT GTTTGTAATG
GTGATTGTAG GATTGTCGGT GATTTTAGTG CTCACAGGGC TCGATCCTAT GACCAGTTTC
ACGGGCGCTA TCACGGCGGT CACGAACGTA GGTCCTGGCT TAGGGCCGAT TATTGGCCCT
GCGGGTAACT TCTCAACCCT GCCCGATGTG GCGAAATGGG CGTTGTCACT CGGCATGCTC
CTCGGTCGTT TAGAAATTCT GACCGTAGCA GTGTTATTCC ACCCGAGTTT CTGGAAGTAT
TAA
|
|---|
| Protein sequence | MLNFRPLLFI LGLFLSMLTA FMLIPLLLAV FNAEETVGSF MLSALVTGIS ASLCLHNGQS
KTINLNIRDM FLLTSLTWLI VSLFAAMPFT LYHGIGYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQSMAK
YLFFIYILLT VACCVAYHLA GMTWFQAINH AMTTLSTGGY STSDSSMAAF SHSAHWVGVF
FMAAGGLPLL MFVHTIQQRD LRIWNDAQVK GFLFFLTFVS CSIGFWLWQT RDIELLDALR
LSSFNVVSVV TTTGYGLTDY GAWGAFANIA FMFLMFVGSC SGSTSGGIKI FRFQIAGAIM
REQLKQQCHP NGIFRERYNN RIISEDIVRS LITFVLLFVM VIVGLSVILV LTGLDPMTSF
TGAITAVTNV GPGLGPIIGP AGNFSTLPDV AKWALSLGML LGRLEILTVA VLFHPSFWKY
|
|---|
| |