| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0018 |
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| Symbol | |
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| ID | 5751710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 20608 |
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| End bp | 21771 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641286259 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001552460 |
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| Protein GI | 160873144 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0128135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAA CGGAACAGAC CCTTTTCGAA CAAATGCGGA TCACTGAGCT GGAGATCGAG
TCTCGTAAGG CGCTCTTCTC TTTTACTGGG GCGGACGTAA AGGCCCTGCA ATCCTTTAAG
CCCATCATTG AAGAAAACAT AGATAAAATC GTCGATGACT TTTATGGCTT ACAAACCAGC
GTTTCAGAAA TTGCGCTGCT GATCGGAGAC TCAGACACCC TTGCCCGCTT ACGTACCGCA
CAGAGAAGAT ATGTGCTCGA TTTATTTAAT GGTGTTTATG ATCTTGAGTA CGTAAACAAT
CGCCTGCGGA TTGGGTTGGT CCATAAACGC ATTGGTGTTG AGCCTAAGCT TTACCTATCT
GCGGTACACA CGCTAAAAGA GCTTATCTAC GCCGTGATCA ACTGTTCAGT GCAAGATACA
CATCAAGGCG AATGTATCCG TGTCGCGATC GATAAACTGG TGCTGTTTGA TGTCACGTTA
GTATTCGATA CTTATATTCG CAGCTTAGTA TCCGAAATTG AGAACGCTAA GGATAAAGCC
GAAAAATATG CCCAAAGCAT GGAAAGCAAA GTCAAAGAGC GGACACAGCA GTTAGAAGAA
CTGTCGCAAA CCGATCCCTT AACAGGCCTG CTCAACGTTA GGCATTTACA AGAAACGGCA
ACGCGCATAC TCAGGGCCGC CCAAAGGCGT GCAGAACCCG TCAGCGTGAT CTACTTAGAC
GTAGATGATT TTAAGTCATT CAACGACACC CAAGGCCATA GATCTGGGGA TGAAGTACTG
CGCGCTGTAG CAAAAGCGAT TAAAGAAATC ACTCGGGCCG AGGACCATTG CTTTCGATAT
GGTGGAGATG AGTTCTGTAT CATCATGCCT AACTGCCGTG AAGAACAAGC TCGGGATAAT
TTCATCACTC GATTCAATCA AAAAATAAAA CTCAGTTTAA ACAATATTTC CTTAAGCTTT
GGCATTATTG ATACTGGACC CTATGAGTAC GAAGAAGCCA ATAGCTTAAT TCATAAAGCC
GATCAGCGAA TGTATAGCTA CAAACGTGCG TCCAAACAGC AGCAACAAAC TATGGCGGCA
GCAAATGATT TAGCACCTGA GAATAGTACC GCTGATGTCC ATTCAATCTC TCAATCTCAA
AGCGTTGATA AAGCCGTCGA GTAA
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| Protein sequence | MLQTEQTLFE QMRITELEIE SRKALFSFTG ADVKALQSFK PIIEENIDKI VDDFYGLQTS
VSEIALLIGD SDTLARLRTA QRRYVLDLFN GVYDLEYVNN RLRIGLVHKR IGVEPKLYLS
AVHTLKELIY AVINCSVQDT HQGECIRVAI DKLVLFDVTL VFDTYIRSLV SEIENAKDKA
EKYAQSMESK VKERTQQLEE LSQTDPLTGL LNVRHLQETA TRILRAAQRR AEPVSVIYLD
VDDFKSFNDT QGHRSGDEVL RAVAKAIKEI TRAEDHCFRY GGDEFCIIMP NCREEQARDN
FITRFNQKIK LSLNNISLSF GIIDTGPYEY EEANSLIHKA DQRMYSYKRA SKQQQQTMAA
ANDLAPENST ADVHSISQSQ SVDKAVE
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