| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0002 |
|---|
| Symbol | |
|---|
| ID | 5751694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1790 |
|---|
| End bp | 2890 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641286243 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_001552444 |
|---|
| Protein GI | 160873128 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000634429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000143129 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT CAATTGATAG GGATGCCCTA TTAAAGCCGT TGCAATTGGT GTGTGGTGCG
GTAGAAAGAC GCCATAATTT GCCCATTTTG TCTAACCTCC TTGTAGAAGT AAGTGGTCAC
TCACTTAAGC TGACCGGAAC AGATTTAGAA GTCGAACTCG TGGGCCAAGT TGTGGTTCAC
GGTGATATCG AAGAAGGTCG TACTACGGTT CCGGCTAAAA AGCTGCTCGA TATTGTTAAG
TCTTTGCCAG AACAAAGCGA ACTGAAAGTC GAACAACAAG ATAATAAATG GTTGCTGCGT
TCAGGCCGTA GCCGTTTTTC CTTAGCGACG TTGCCCGCAG AAGAATATCC CAACGTTGAA
GCCTTCCAAG CTGAGATTGA ATTTAGTTTG AAGCAGGGCG TGTTGAAGTC GATTATCGAC
TCAACGCAAT TTTCTATGGC TAACCAAGAT GTGCGTTATT ACCTCAACGG TTTATTGTTT
GAAACTGAAG GTAATGTGTT GCGCGCGATT GCGACCGACG GTCACCGTTT AGCCTTAAGT
CACCGCACGA TTGAAGCACA ATTACCTGAA AAACAAGTCA TTGTTCCACG CAAAGGCGTA
ATGGAAATGG CACGTTTATT GGAATCGGAC GATCTCGATA TCGCGATTGC TATCGGTGAT
AATGCCATTC GTGCCACTAC GGCTAACACT GTATTTACCA GTAAATTAGT CGATGGCCGC
TTCCCTGATT ATCGCCGTGT ATTGCCAAAG GGCGGTGATA AAATAGTGAT TGCGAGTCGT
AATCACCTGA AGCAAGCGCT GACCCGCGCA TCGATTTTAT CGAACGAAAA ATTCCGTGGT
GTGCGTATTC AACTCGAAAA TGGTCTGCTT AAGATCACCG CTAACAATCC TGAACAGGAA
GAAGCGGAAG AGATCATCGA TGTGGAATAC AACAACCAAG CCTTAGAAAT TGGTTTTAAC
GTCAGTTATT TACTCGACGT GCTCAACAAC CTTAAGTCAG ATGATGTGCG TATCACGCTC
ATTGATGGTA ACTCCAGCGC CTTAATCGAA AACCATTTGG AAGAAGATTC CATGTATGTG
GTTATGCCGA TGCGCTTATA A
|
|---|
| Protein sequence | MKFSIDRDAL LKPLQLVCGA VERRHNLPIL SNLLVEVSGH SLKLTGTDLE VELVGQVVVH
GDIEEGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEEYPNVE
AFQAEIEFSL KQGVLKSIID STQFSMANQD VRYYLNGLLF ETEGNVLRAI ATDGHRLALS
HRTIEAQLPE KQVIVPRKGV MEMARLLESD DLDIAIAIGD NAIRATTANT VFTSKLVDGR
FPDYRRVLPK GGDKIVIASR NHLKQALTRA SILSNEKFRG VRIQLENGLL KITANNPEQE
EAEEIIDVEY NNQALEIGFN VSYLLDVLNN LKSDDVRITL IDGNSSALIE NHLEEDSMYV
VMPMRL
|
|---|
| |