| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_18311 |
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| Symbol | |
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| ID | 5731625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1659829 |
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| End bp | 1660845 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641286218 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001551716 |
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| Protein GI | 159904372 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCC CTCTGGAATC TACCAATGAT GGTTCGTCAT CATCTGTAGA TCTTGCTATA
TCAAGCAATT CAAAAAATCA GCAAGAAAAA TCTGCTGGCA ATAGTCAAGC TTCTCGAAAC
CGAACAGGTG GCAGACTTGC AACTGATTCA ATTGGTTTTT ATCTAAGTAG TATTGGCAGA
GTGCCGTTGT TAACGCCAGC CGAAGAGATC GAGTTAGCGC ACCATGTCCA AAAAATGAAG
GAATTATTAG ATATAGAGAA AGAAAAGTTA TCTGCTCGGC AACGTCATCA AATTCGTATG
GGGAAAAGAG CACGAGATAG GATGATGGCT GCAAACCTAC GACTTGTTGT AAGTGTTGCT
AAGAAATATC AGAATCAAGG TCTGGAACTT CTTGATTTGG TTCAAGAAGG GGCAATTGGC
TTAGAACGTG CTGTTGATAA ATTTGATCCT GCAATGGGAT ATAAGTTTTC AACCTATGCC
TATTGGTGGA TACGTCAAGG AATGACAAGA GCTATAGACA ATAGTGCTAG AACAATTCGC
TTGCCTATTC ACATCAGTGA AAAGCTCTCA AAAATGCGTC GGATTTCGAG AGAACTATCT
CATCGCTTTG GACGACAACC CAATAGAGTA GAACTTGCGA ATGCCATGGG GATCGAACCT
CAAGATTTAG AAGATCTTGT AGCCCAAAGT GCTCCTTGTG CTTCATTAGA TTCTCATGCA
CGTGGGGAGG AAGATCGCAG TACCCTTGGC GAATTAATTC CAGACCCTAA TTATGATGAG
CCAATGGCAG GGATGGATAG AAAGATGCAA AAAGAGCATT TAGGAGGATG GTTGTCTCAA
TTAAATGAAA GAGAGCAAAA GATTATGCGT TTACGATTTG GACTTGATGG TGAAGAGCCT
TTAACTTTGG CTGAAATTGG TAGACAAATT AATGTATCTA GAGAACGGGT GAGGCAACTG
GAAGCAAAAG CGATTCTGAA GCTAAGAGTA ATGACAACGC ATCAACAAGC AGCTTAA
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| Protein sequence | MGIPLESTND GSSSSVDLAI SSNSKNQQEK SAGNSQASRN RTGGRLATDS IGFYLSSIGR
VPLLTPAEEI ELAHHVQKMK ELLDIEKEKL SARQRHQIRM GKRARDRMMA ANLRLVVSVA
KKYQNQGLEL LDLVQEGAIG LERAVDKFDP AMGYKFSTYA YWWIRQGMTR AIDNSARTIR
LPIHISEKLS KMRRISRELS HRFGRQPNRV ELANAMGIEP QDLEDLVAQS APCASLDSHA
RGEEDRSTLG ELIPDPNYDE PMAGMDRKMQ KEHLGGWLSQ LNEREQKIMR LRFGLDGEEP
LTLAEIGRQI NVSRERVRQL EAKAILKLRV MTTHQQAA
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