Gene P9211_18291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_18291 
Symbol 
ID5731611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1656223 
End bp1657476 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content38% 
IMG OID641286216 
Productmajor facilitator superfamily multidrug-efflux transporter 
Protein accessionYP_001551714 
Protein GI159904370 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCA GAAATAGATT AATACCTATC CAATTATGTG CTTTTTTTAC TCTTCTAGAT 
GACCGGTTAG GAGAAAGTTT TGTTTTCCCA TTGCTACCAT TTCTCCTAGA GCGTTTTACC
AGTAGTGGGG TCACCCTTAC TCTTCTTACT GGAAGTTATG CATTAGCACA ATTCACTGTC
TCTCCTTTAA TTGGGGCATT GAGTGATCGT TTTGGTAGGA AGCCTATTCT AAAAATCTGT
GTGGGGGGTT CACTAGTAGC CATTAGTCTA TTTGGTATTA CACTTAGTTT AAATTGGACA
AACATTTTAC CAATCTGGGC GACAGGTTTA CCGTTGCTTT TACTATTTAT AGCAAGAATT
ATCGATGGAC TTAGTGGAGG TACAGCTGCT ACAGCAACTG CAATTCTCGC AGATATCTCA
ACCCCAGAGA ATCGAGCAAA AACATTTGGT TTAATTGGCT TAGCTTTTGG TCTTGGATTT
GCAATTGGTC CACCACTTGG TGGAAGATTA GCTGAAGTAA ACCCAACATT AGCCGTAATA
CCAGCAGCAT TATTTGCTCT AATCAATTTA GGATTAGTTA CATGGTTTCT ACCTGAAACA
TTACCTATCA ATTCAAGAAA TCGTCTACCA AAAAAGCGAA ACTTAAATCC ATTTAGTCAA
TTATCCAAAC TATTTAGAAA TCCATCTGTA AGAAAGCCAT GTCTTAGTTT TTTTCTCTTT
TTTATGGCAT TTAATGGTTT CACTGCAATC TTGGTTCTCT ACCTTAAAGA AGCATTCTCA
TGGACTAGTG CACTTTCAGG ATGGGTTTTT GCACTAGTTG GGCTTATAGC AATGATTGTC
CAAGGAGGGT TAATTGGACC TTTAGTAAAA CAATTCGGGG AATTAAAACT GACAATTACA
GGACTCGGAT TACTAACCAT TGGATGTTTA CTAATACCTA TGGCAAATCA GGAAAACTCA
ATACCAATAG TATTTACTGG AGCTGCCTTG TTAGCAACAG GAACAGGTTT AGTTACGCCT
TGTCTACGCA GTCTGATATC TAGACGTATA GACATTTCTA GCCAAGGTAC TGTTTTAGGT
GGCCTACAAG GACTACAAAG TTTAGGTACT TTTGTTGGAG GGATAACTGC TGGTTTTGTA
TATGATCAAT TAGGGCAAAA AAGTCCTTTC TTTGGAGGTG CAATAATTTT AGTCATAGTA
ATAGCATTGT TAATAGGAAT ACCACTAGAC AAAAGGAAAG CACAAGTGAT ATGA
 
Protein sequence
MASRNRLIPI QLCAFFTLLD DRLGESFVFP LLPFLLERFT SSGVTLTLLT GSYALAQFTV 
SPLIGALSDR FGRKPILKIC VGGSLVAISL FGITLSLNWT NILPIWATGL PLLLLFIARI
IDGLSGGTAA TATAILADIS TPENRAKTFG LIGLAFGLGF AIGPPLGGRL AEVNPTLAVI
PAALFALINL GLVTWFLPET LPINSRNRLP KKRNLNPFSQ LSKLFRNPSV RKPCLSFFLF
FMAFNGFTAI LVLYLKEAFS WTSALSGWVF ALVGLIAMIV QGGLIGPLVK QFGELKLTIT
GLGLLTIGCL LIPMANQENS IPIVFTGAAL LATGTGLVTP CLRSLISRRI DISSQGTVLG
GLQGLQSLGT FVGGITAGFV YDQLGQKSPF FGGAIILVIV IALLIGIPLD KRKAQVI