| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_18071 |
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| Symbol | ligA |
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| ID | 5731773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1635274 |
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| End bp | 1637367 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641286193 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_001551692 |
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| Protein GI | 159904348 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.113319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCAAA ACTCAAGCAA TCTTTCAAAA CGGTCTTTTG AGCTTCGCAA ATTGCTCAAT
AGGGCAAACC ATGCTTATTA CGTATTGGAT ACTCCTTTAA TGGAAGATAC GGTTTATGAC
CGTCTATACA GAGAACTATT AAATATAGAA AAAAATCATC CATCACTAAT CACGGCAGAT
AGTCCGTCTC AACGGTTAGG CAGTACGCCA GCAAAAGAAT TTGTAAAGGT TGAGCACAAA
ATACCCTTAA TGAGTCTAGA CAATGCATTC AATTTTGAAG AACTGCAGGA CTGGGACTTG
CGAATAAGGA AATTACTTAA TCAAAAAAAT AACTTTGGCA TTCTAAAAAC ATCTATTGAT
TTTGCATGCG AACTCAAAAT AGATGGCAGT GCATTGGCAT TAAGTTATGC CAATGGGGTA
CTGGTTCAAG CTGCTACTCG AGGCGATGGC GTAGCAGGAG AAGAAATTAC AGCAAATGTG
AAAACAATTA CTTCCATACC ATTATCACTT GATATAGAAA ATCCCCCAAG TTGGCTAGAA
GTTCGAGGAG AAGCTTTTCT TCCCAAACAA ACTTTTGATG GCATTAATTT GCTTCGTAAG
CAGCAAAGAG AAGCTTTATT TGCTAATCCC AGAAATGCGT GTGCTGGAAC ACTTAGGCAA
TTGGATCCAC AAATAGTTGC ATCCCGGCAA CTGGATTTCT TTGCCTACAA AATGTATCTT
CCAAAAGATT GGGACCCACA AGGAGAAAAT ATACATCAAC CAGAAGCCCA AGATGCAGCA
CTTAAATGGT TAAAAAAAGC CGGCTTTAAA GTGAATCCAA ATACAAAAAT TTTTAAAAGT
TTGCATGAAG TGCAATCCTT CTTTGATATT TGGGAGAAAA AGCGACACAA GCTCCCATAT
ACAACAGATG GAGTAGTAGT AAAGGTCAAC AATTTTAAAC TTCAAGAGAT GCTTGGGGTC
ACACAAAAGT CACCTCGTTG GGCTATTGCA CTTAAGTACC CTGCTGAAGA GGCCCCAACA
AAACTCATTA ATCTCTCATA CCAGGTTGGA CGAACAGGAA CAGTAACGCC AGTTGCAGAG
TTCGAACCGA TTCCACTAGC AGGAACAATA GTCAGAAAAG CAACTCTACA TAATGCGGAT
CGTCTGCAAT CTCTGGATCT TCATAACGAA GATACAATTG TTGTTAGAAA AGCAGGAGAA
ATCATTCCAG AAGTTGTTTG TGTTTTAAAA GAATTGAGGC CTCAAAATTC AACTCGTTTA
TATCTACCTA GCAATTGTCC AGAATGTGAT GAGAAACTTG TGAGAGGAAC TGACCAAGCA
GCAACGAAGT GTGTAAATAA TCTTTGTCCA GCAATTATAC AAGGAGCTCT ACGTCATTGG
GTGAGTAAGA AAGCGATGAA TATTGATGGA GTTGGATCAA AGGTAATTGA GCAATTGGTC
AATAAAGGCA TAGTCAAGTC AATTCCTGAT CTTTATGAGC TTAACTATCA AATGCTTTTT
GGATTAGAAA GAATGGGTGA AAAATCTGCA CATAAGGTCA TCGAATCTAT AGAAAAATCC
AAAACACAGC CTTGGAATAA ACAATTATAT GGTCTAGGAA TATTACATAT AGGTGAAGGT
AATGCGAAGC TCCTAGCCAA TGCTTTTGCT AGTGAAGATG AACTTTCTCA TGCAGCCATA
AATTCACCAG AACGAATCGC AAAAATTCAT GGCATTGGCA ATGAAATGGT GGAATCATTA
CAAGAATGGT TTGAAGATGA ATCTAATCAG AGAATTATCA GTAGGCTAAA AGAATTAGGA
GTACAATTAA AGTCGACTGC AAATGATAGT GGTGCTATAA AAAGCGTCAT CAATTCTTCT
AACAAAGAAG TTTTAGGGAA AAGATTTGTT CTCACAGGGA CGATGGAGTC TATCAACAGA
GACGTCGCAC AGGAAATGAT TGAAAAAGCA GGTGGAAAAG TAAATTCTTC CATCAGCTCG
AAAACAACTT ACCTGATAAC TGGGAGCAAT CCGGGTAGCA AACTTAGTAA AGCAAAGGAA
CTAGGAATTA AAATTATTAA TGAAGAAGAT TTCTTCAACC TTCTTTCTAA ATAA
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| Protein sequence | MEQNSSNLSK RSFELRKLLN RANHAYYVLD TPLMEDTVYD RLYRELLNIE KNHPSLITAD
SPSQRLGSTP AKEFVKVEHK IPLMSLDNAF NFEELQDWDL RIRKLLNQKN NFGILKTSID
FACELKIDGS ALALSYANGV LVQAATRGDG VAGEEITANV KTITSIPLSL DIENPPSWLE
VRGEAFLPKQ TFDGINLLRK QQREALFANP RNACAGTLRQ LDPQIVASRQ LDFFAYKMYL
PKDWDPQGEN IHQPEAQDAA LKWLKKAGFK VNPNTKIFKS LHEVQSFFDI WEKKRHKLPY
TTDGVVVKVN NFKLQEMLGV TQKSPRWAIA LKYPAEEAPT KLINLSYQVG RTGTVTPVAE
FEPIPLAGTI VRKATLHNAD RLQSLDLHNE DTIVVRKAGE IIPEVVCVLK ELRPQNSTRL
YLPSNCPECD EKLVRGTDQA ATKCVNNLCP AIIQGALRHW VSKKAMNIDG VGSKVIEQLV
NKGIVKSIPD LYELNYQMLF GLERMGEKSA HKVIESIEKS KTQPWNKQLY GLGILHIGEG
NAKLLANAFA SEDELSHAAI NSPERIAKIH GIGNEMVESL QEWFEDESNQ RIISRLKELG
VQLKSTANDS GAIKSVINSS NKEVLGKRFV LTGTMESINR DVAQEMIEKA GGKVNSSISS
KTTYLITGSN PGSKLSKAKE LGIKIINEED FFNLLSK
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