| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_17741 |
|---|
| Symbol | lysC |
|---|
| ID | 5730653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 1599025 |
|---|
| End bp | 1600791 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641286160 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_001551659 |
|---|
| Protein GI | 159904315 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTTC TGGTGCAAAA ATTTGGGGGC ACCTCTGTAG GAAGTGTGGA GCGAATTCAA
TCAGTCGCTC AAAGAATTGC ACTTTGCAAA GACCAAGGTT TTGAACTTGT AATAGTTGTC
TCTGCAATGG GCAAAGCCAC CGATGAGCTA ACCCAACTCG CACAAGAAAT TAGTCACAAG
GCTCCCAAAA GAGAAATGGA TATGCTTCTT GCCACAGGAG AACAAGTATC TATTGCTCTA
CTATCAATAG CCCTCAATGA AATAGGCATC CCAGCAACAT CAATGACAGG AGCACAAGTT
GGCATTGTGA CTGAATCATC CCATGGTCGA GCAAGAATTC TTGAGATCAA AACTGCACGA
ATTGAAAATC TACTAAGCCA GGGGCAAGTC GTAGTTGTAG CAGGGTTTCA AGGTACAAGC
TTAGGTAGCG GAGGAACAGC AGAAATAACC ACTTTAGGGA GAGGAGGATC AGACACCTCT
GCCGTGGCAC TGGCAGCAGC ACTGCATGCA GATGCATGCG AAATCTATAC AGATGTTCCA
GGAGTTCTAA CTACTGATCC TCGCAAAGTT CCAAATGCGC AATTAATGAA TAGCATCAGT
TGTGATGAAA TGCTTGAGTT AGCAAGTCTT GGAGCAGCTG TCTTGCACCC AAGAGCAGTA
GAAATAGCGC GAAACTATGG CATCAAACTT GTTGTACGTT CAAGCTGGGA TGAAACACCA
GGAACAACCA TAACAAGTCA AGGGAATAGA GAAATAGGCA AAGAAGGGTT AGAGCTAGGT
CGTCCTGTGA CAGGGGTTGA ATTAGTTGAG AACCAAGCTG TTCTAGGGCT TGCTCACATT
CCTGATAAAC CTGGAATTGC GGCAGATTTA TTTGAAACTC TTTCCAAGGG GGGGGTAAAT
GTAGATCTGA TAATCCAATC AACTCATGAA GGCAATAGTA ATGACATCAC CTTTACTGTC
GCTGAAGAAG AATTATCTCT AGCAAAAGCC CTATGCAAGC AATTCATTAA TAAGTTTGGA
GGTGAACTAT CTACTCAAAG TGAAATGAGC AAATTAAGTA TTCGAGGTGC CGGAATTATG
GGAAGGCCAG GCATAGCAGC AAAGTTATTC GAGACAATCT CCAAAGCGGG AATTAATTTA
AGGCTTATTG CTACTAGCGA AGTGAAGTTA AGCTGTGTTA TTGATTCTGG AATGGGATGC
AAAGCACTTA GAGCTGTTAG CGAAGCATTT GAAATTAAAA AAGATCACAT TCACATTAAT
CCCGAAATTT GTAATTTAGA AGAGCCAGAA GTGAGAGGAG TTGCTTTAGA TACAAATCAA
GCTCAAATGA GTGTAATAAA TGTTCCTGAT ATTCCTGGAA CTGCTGCAAC TCTTTGTAGA
GCGTTAACAG AGTCTGGTAT TAGCTTAGAT ACAATTGTGC AATCAGAAAG AAAACATAAA
AAAGGTGGTC GCAATATTAG TTTCACCCTT CACAAAGAAG ATCGTGAGAA GCTCAATAAA
GTTCTTTTGC CACTATTGAA AACTTGGCAT GAGGCGTATT TACAAGATGG AAAAGCAATT
GCTCGTATCA GTTCAGTTGG TGCAGGGATG CCAGCAACTA TTGGAACTGC AGCTCGAATG
TTTAGGGCCC TAGCCAATGC AGAAATTAAT ATAGAAATGA TCGCAACTAG TGAAATTCGA
ACTACTTGTA TAGTTTCTGA GAGCTATGGA ACCAAAGCTC TCCAAGCAGT ACATGAATTC
TTTCAATTAA ATGAAAGCGA TAAATAA
|
|---|
| Protein sequence | MVLLVQKFGG TSVGSVERIQ SVAQRIALCK DQGFELVIVV SAMGKATDEL TQLAQEISHK
APKREMDMLL ATGEQVSIAL LSIALNEIGI PATSMTGAQV GIVTESSHGR ARILEIKTAR
IENLLSQGQV VVVAGFQGTS LGSGGTAEIT TLGRGGSDTS AVALAAALHA DACEIYTDVP
GVLTTDPRKV PNAQLMNSIS CDEMLELASL GAAVLHPRAV EIARNYGIKL VVRSSWDETP
GTTITSQGNR EIGKEGLELG RPVTGVELVE NQAVLGLAHI PDKPGIAADL FETLSKGGVN
VDLIIQSTHE GNSNDITFTV AEEELSLAKA LCKQFINKFG GELSTQSEMS KLSIRGAGIM
GRPGIAAKLF ETISKAGINL RLIATSEVKL SCVIDSGMGC KALRAVSEAF EIKKDHIHIN
PEICNLEEPE VRGVALDTNQ AQMSVINVPD IPGTAATLCR ALTESGISLD TIVQSERKHK
KGGRNISFTL HKEDREKLNK VLLPLLKTWH EAYLQDGKAI ARISSVGAGM PATIGTAARM
FRALANAEIN IEMIATSEIR TTCIVSESYG TKALQAVHEF FQLNESDK
|
|---|
| |