Gene P9211_17191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_17191 
SymbollldD 
ID5730186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1545805 
End bp1546977 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content41% 
IMG OID641286102 
ProductL-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases 
Protein accessionYP_001551604 
Protein GI159904260 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCCA ATGTTTCTTC AACCAACGTT GTGAACATTA GTGATCTTCG CTTATTAGCA 
AAGAAGCGTT TGCCTCAGAT GGTTTTTGAT TATATAGATA GTGGTGCAGA CAGGGAACAA
ACTTTATCTC AAAATTGTAC TGCCTTTAAA GAAATATATT TTCGGCCAAG ATGCGCTGTT
GCTACTCCAT CTTGTGATTT AAATATATCG GTATTGGACC AAGAATTTAA ACTTCCTTTC
ATTCTTGCCC CAGTTGGTAG TAGCAGAATG TTTTATCCCA AAGGAGAAGT TGTTGCTGCT
CGCGAGGCAG GCATAGCTGG GACAGGGTAT ACCCTTTCAA CATTATCTGG CTGCAGATTA
GAGGAAGTAA AGCAAGCAAC TAACTGTCCT GCTTGGTATC AGTTGTATTT GCTAGGCGGA
AGAGATGTTG CGATGCAAAC AATTGAAAGG GCAAAATCTG CTGGATTTTC AGCAATAGTT
GTCACTATTG ATACTCCAAT ATCTGGCTTG CGAGAACGTG ATGTTCGCAA TGGAACTAAG
CAGCTCTTAT CAAGGAATCC TATTCAAATG CTTCCTTATA TTCCCCAGAT GTTAATAAAG
CCTTGTTGGT TAACTCAATG GTTAGGGGAT GGAGGTTTAA TGAGTTTCCC TAATGTTGAG
TTGGAAAGTG GTCCTATGGG TTATACAGAA ATTGGACCAG CCTTGGAGGA ATCAGTAGTC
ACTTGGGAAG ATTTGAATTG GATCAGAGAA GCATGGGGAG GGAAAATAAT TGTTAAGGGA
ATTCATATTG GTGAGGATGC GAGAAAGGCT ATTGATTTAG GGGTAGATGC AGTAGTTGTG
TCTAACCATG GAGCACGTCA ATTAGATAGT GTTGCGCCTA CAATTCAAGT CCTTCCAGAA
GTAGTGAAAG CTGTAAATGG AGAAATAGAT GTATTAATTG ACGGGGGAAT TCGTAGGGGA
GGCGATGTGG TAAAAGCATT GTGCTTAGGT GCTAAAGGGG TCTTAATTAG CAGAGCATAT
GCATATGGCT TGGCAGCTGG TGGTGGCCCT GGTGTGGCTA AGGCAATAGA GATTATTAAA
ACTGATATTT TGCGTACAAT GAAATTATTA GGATGTGATT CTGTTAAAAA GCTAGATAGG
TCGTTTGTAA CTATTCCACC AAGCTGGGCT TAG
 
Protein sequence
MGANVSSTNV VNISDLRLLA KKRLPQMVFD YIDSGADREQ TLSQNCTAFK EIYFRPRCAV 
ATPSCDLNIS VLDQEFKLPF ILAPVGSSRM FYPKGEVVAA REAGIAGTGY TLSTLSGCRL
EEVKQATNCP AWYQLYLLGG RDVAMQTIER AKSAGFSAIV VTIDTPISGL RERDVRNGTK
QLLSRNPIQM LPYIPQMLIK PCWLTQWLGD GGLMSFPNVE LESGPMGYTE IGPALEESVV
TWEDLNWIRE AWGGKIIVKG IHIGEDARKA IDLGVDAVVV SNHGARQLDS VAPTIQVLPE
VVKAVNGEID VLIDGGIRRG GDVVKALCLG AKGVLISRAY AYGLAAGGGP GVAKAIEIIK
TDILRTMKLL GCDSVKKLDR SFVTIPPSWA