Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_17051 |
Symbol | rnd |
ID | 5730081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 1531922 |
End bp | 1532566 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641286087 |
Product | putative ribonuclease D |
Protein accession | YP_001551590 |
Protein GI | 159904246 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTAC CACCTAGTTC ACCCAAAACT TTTCATATTC TTGATAGAGA TCTTGATGAA AAAAGCTTCA AAGAATTCAG CACTAAGGCT TCTTTAGCTA TAGACACTGA AGCAATGGGA TTGATGCATG GTCGAGACCG GTTATGCCTT GTCCAAATTT GTGATGAATC TGACAACGTT ATATGCATAA GAATTGAACG CAATCAAAAA TCAGCACCTC TTTTAAAAAA CCTTTTAGAG AACCCGTCAA TTCAAAAGAT TTTTCATTTT GCTCGCTTTG ATGTTGCCGC CCTTGAAGTG AATCTTGATA TTAAAGTTAC TCCTATTTTT TGTACAAAAG TTGCTAGCAA AATTGGTCGG ACATATAGTC CTCGCCATGG ACTCAAGGAA GTAGTGATGG AGCTAGTAAA TGTAGAACTA GACAAACAAG CTCAAAGTAG TGATTGGGGA GCAGTTGAAG ATCTTAGTGC CAAGCAACTA GCCTATGCTG CAAATGATGT GAGATACCTA ATCAAAGCCA AAGAGAAGTT GGAGCATATG CTGAAGAGAG AAGGGCGATG GGAATTAACT ACAAAATGCT TCCAATGCAT CCCTGTAATG TCGGAACTAG ATATTTACCG TTTTGGGAAT ATCTTTGAAC ATTAG
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Protein sequence | MPLPPSSPKT FHILDRDLDE KSFKEFSTKA SLAIDTEAMG LMHGRDRLCL VQICDESDNV ICIRIERNQK SAPLLKNLLE NPSIQKIFHF ARFDVAALEV NLDIKVTPIF CTKVASKIGR TYSPRHGLKE VVMELVNVEL DKQAQSSDWG AVEDLSAKQL AYAANDVRYL IKAKEKLEHM LKREGRWELT TKCFQCIPVM SELDIYRFGN IFEH
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