Gene P9211_17051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_17051 
Symbolrnd 
ID5730081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1531922 
End bp1532566 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content39% 
IMG OID641286087 
Productputative ribonuclease D 
Protein accessionYP_001551590 
Protein GI159904246 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTAC CACCTAGTTC ACCCAAAACT TTTCATATTC TTGATAGAGA TCTTGATGAA 
AAAAGCTTCA AAGAATTCAG CACTAAGGCT TCTTTAGCTA TAGACACTGA AGCAATGGGA
TTGATGCATG GTCGAGACCG GTTATGCCTT GTCCAAATTT GTGATGAATC TGACAACGTT
ATATGCATAA GAATTGAACG CAATCAAAAA TCAGCACCTC TTTTAAAAAA CCTTTTAGAG
AACCCGTCAA TTCAAAAGAT TTTTCATTTT GCTCGCTTTG ATGTTGCCGC CCTTGAAGTG
AATCTTGATA TTAAAGTTAC TCCTATTTTT TGTACAAAAG TTGCTAGCAA AATTGGTCGG
ACATATAGTC CTCGCCATGG ACTCAAGGAA GTAGTGATGG AGCTAGTAAA TGTAGAACTA
GACAAACAAG CTCAAAGTAG TGATTGGGGA GCAGTTGAAG ATCTTAGTGC CAAGCAACTA
GCCTATGCTG CAAATGATGT GAGATACCTA ATCAAAGCCA AAGAGAAGTT GGAGCATATG
CTGAAGAGAG AAGGGCGATG GGAATTAACT ACAAAATGCT TCCAATGCAT CCCTGTAATG
TCGGAACTAG ATATTTACCG TTTTGGGAAT ATCTTTGAAC ATTAG
 
Protein sequence
MPLPPSSPKT FHILDRDLDE KSFKEFSTKA SLAIDTEAMG LMHGRDRLCL VQICDESDNV 
ICIRIERNQK SAPLLKNLLE NPSIQKIFHF ARFDVAALEV NLDIKVTPIF CTKVASKIGR
TYSPRHGLKE VVMELVNVEL DKQAQSSDWG AVEDLSAKQL AYAANDVRYL IKAKEKLEHM
LKREGRWELT TKCFQCIPVM SELDIYRFGN IFEH