Gene P9211_16661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_16661 
SymbolrplE 
ID5731817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1498085 
End bp1498624 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID641286046 
Product50S ribosomal protein L5 
Protein accessionYP_001551551 
Protein GI159904207 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCA AACATCGCTA TCGAGAGACA ATTCGCCCCA AATTGCTTAA AGACTTGGGC 
CTCTCCAATA TTCATCAAGT ACCTAAGGTT GTGAAAGTCA ACGTTAATAG GGGGTTAGGA
GAAGCTGCCC AAAATTCTAA GACTTTGGAA GCTTCTCTTT CTGAGATGGC AACTATTACT
GGGCAAAAAG CCCTTGTCAC TAGGGCAAAA AAAGCTATTG CAGGCTTTAA AATTCGTGAG
GGCATGCCAA TAGGTTGTAC TGTCACGCTT CGTGGAGAAA GAATGTATGC ATTTTTAGAA
CGTTTAATTA ATCTTGCTTT GCCAAGAATT CGAGATTTTA GAGGAGTCAG TCCAAAGAGT
TTTGATGGTC GCGGAAACTA CACTCTTGGA GTCAAAGAGC AACTTATTTT TCCTGAAATC
TCTTTTGACA AAATTGACAC TATTAGAGGT ATGGATATCA CCATAGTTAC TAGTGCTAGA
TCCGACGAGG AGGGCAGGGC TCTCTTAAAA GCGTTGGGAT TTCCTTTCCG TAGTACCTGA
 
Protein sequence
MSLKHRYRET IRPKLLKDLG LSNIHQVPKV VKVNVNRGLG EAAQNSKTLE ASLSEMATIT 
GQKALVTRAK KAIAGFKIRE GMPIGCTVTL RGERMYAFLE RLINLALPRI RDFRGVSPKS
FDGRGNYTLG VKEQLIFPEI SFDKIDTIRG MDITIVTSAR SDEEGRALLK ALGFPFRST