| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_16551 |
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| Symbol | rpoA |
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| ID | 5730206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 1491597 |
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| End bp | 1492535 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641286035 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001551540 |
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| Protein GI | 159904196 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.271091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCAAT ACCAGATTGA TCGGATCGAC CATCAAATTT CCGATGACCG CTCTCAAACA
GGTTTATTCC TCATAGGACC TCTTGAAAGA GGTCAAGCAA CTACGTTAGG TAACTCTCTT
CGAAGAGTTC TTATGGGAGG TCTTGAAGGA AGCGCTGTTA CGGCAGTTCG CATATCTGGC
GTAAATCATG AATATGCAAC TATCCCTGGA GTGAGAGAAG ATGTTTTAGA TATTCTCCTA
AATTGCAAGC AGCTTTCAGT AAATAGTAGA AGTCCAGAAC TTGAAATAGG CCGTTTAGTG
GTTAATGGAC CTGCAGAAGT TAAAGCCCGT GATGTGCAAT TTTCTTCTCA GGTACAAGTT
GTTGATGGAG ATAGACCAAT AGCCACTGTG CATTCAGGAC ATAGCCTTGA ATTGGAGCTG
CATGTAGAAA GGGGAGTTGG CTATCGTCCA GTTGATCGTC ATAACGAAGA AACAACTTCA
ATTGATTTGC TTCATATTGA TGCTGTTTTT ATGCCAATTA AGAAGGTGAA TTTCAATATT
GACGAAACGG CTGTTGCTGA AGGTGGTTCA ACTAGAGAAA GATTGAAAAT GGAGATAGTA
ACTGATGGAT CCATGTCTCC TGATGATGCT TTAGCAGAGG CGGCAAATCA ATTAATAGAA
CTATTTCAAC CTTTAGCAAC AGTAACTATG GTTGAAGAAA TACCTCAAGA GCCAGAACCT
TCTGCTGAGG CTCAAATTCC TTTAGAAGAA TTGAATCTAT CTGTTAGAGC CTATAACTGT
TTGAAAAGAG CCCAAGTGAA TTCAGTTTCT GATTTGATGG GATTTAGCTA CGAGGATCTA
TTAGAAATTA AGAATTTCGG GTCCAAGTCT GCTGATGAAG TTATTGAAGC TTTAGAACGA
ATTGGAATTT CTATTCCACA GAGTCGGACT TCAGCGTAA
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| Protein sequence | MLQYQIDRID HQISDDRSQT GLFLIGPLER GQATTLGNSL RRVLMGGLEG SAVTAVRISG
VNHEYATIPG VREDVLDILL NCKQLSVNSR SPELEIGRLV VNGPAEVKAR DVQFSSQVQV
VDGDRPIATV HSGHSLELEL HVERGVGYRP VDRHNEETTS IDLLHIDAVF MPIKKVNFNI
DETAVAEGGS TRERLKMEIV TDGSMSPDDA LAEAANQLIE LFQPLATVTM VEEIPQEPEP
SAEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT SA
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