Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_15551 |
Symbol | groEL |
ID | 5730378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1387179 |
End bp | 1388810 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641285933 |
Product | chaperonin GroEL |
Protein accession | YP_001551440 |
Protein GI | 159904096 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAGC GAATTATTTA CAACGAGCAA GCCCGCCGAG CACTCGAGCG TGGTATTGAC ATCTTGGCCG AATCAGTGGC CGTTACTCTT GGTCCTAAGG GACGCAATGT AGTCCTAGAA AAGAAATTTG GGGCTCCTCA GATCATTAAT GATGGTGTAA CCATTGCTAA AGAGATCGAA TTAGAGGATC ACATAGAAAA TACTGGTGTA GCCCTTATAC GCCAGGCAGC TTCAAAAACT AATGATGCTG CTGGTGATGG CACTACAACA GCGACTGTTC TTGCTCATGC AATGGTAAAA GCCGGATTGC GCAATGTTGC TGCTGGTGCC AATGCGATCA CTTTGAAGAA AGGTATTGAT AAAGCCACTG ATTTTCTTGT TAAAAAGATT CAAGAACAGG CTAAGCCGAT TAGTGACAGT AATGCCATTG CTCAATGCGG GACAATTGCT GCAGGGAATG ATGAGGAAGT TGGTCAGATG ATTGCCAGTG CTATGGATAA GGTTGGCAAG GAAGGAGTGA TTTCTCTTGA AGAAGGAAAG TCTATGACGA CAGAACTTGA AGTCACTGAA GGAATGCGTT TTGACAAGGG ATATATATCT CCTTATTTCG CTACTGACAC TGAGAGAATG GAGGCGGTTT TGGACGAGCC TTATATCCTT CTCACAGATA AAAAGATTGG TTTAGTTCAG GATCTTGTTC CAGTTCTTGA GCAAATTGCC AAAACTGGCA AACCATTATT AATTGTCGCT GAGGATATTG AGAAGGAGGC TCTTGCAACA TTGGTTGTTA ATCGTTTACG TGGTGTCCTC AATGTTGCAG CTGTAAAGGC TCCTGGTTTT GGTGATCGTA GAAAGGCAAT GCTTGAAGAT ATGGCTGTAT TGACTAATGG ACAGCTGATT ACTGAAGATG CTGGCCTGAA GCTAGAGAAT GCCACATTGG AAATGCTTGG CACTTCTAGA AGAGTAACCA TCAACAAAGA TACGACAACC ATTGTTGCTG AAGGTAATGA GGTTGCAGTC AAAGCAAGAT GCGAGCAAAT AAAGAAGCAA ATGGATGAGA CCGATTCAAC TTATGACAAG GAAAAATTAC AGGAACGTCT TGCAAAACTT GCTGGTGGAG TTGCTGTAGT CAAAGTCGGT GCAGCTACTG AGACTGAAAT GAAAGATAAG AAACTTCGTT TAGAAGATGC AATTAATGCA ACTAAAGCAG CAGTTGAAGA GGGCATAGTC CCTGGAGGTG GAACAACACT CGCTCATCTT TCTCCTGAAC TTCAATCTTG GGCTAGTAAT AATCTTTCTG GAGAAGAGCT TATAGGAGCA AATATTGTTG AAGCTGCCTT AACAGCACCA TTAATGCGCA TTGCTGAAAA TGCTGGTGCA AATGGAGCGG TAATCGCAGA GCATGTAAAA AATAAGCCTG TTAATGATGG TTACAACGCT GCTTCTGGAG AATATGTGGA CATGCTTAAT GCAGGAATTG TTGATCCAGC AAAAGTTACT CGTTCAGGTT TACAGAATGC TGCCTCAATT GCAGGTATGG TTCTTACCAC TGAATGTATA GTTGCTGATT TGCCTGAGAA GAAAGATGCT GCTTCCGCTG GTGCCGGAAT GGGAGGAGAC TTCGATTATT AA
|
Protein sequence | MAKRIIYNEQ ARRALERGID ILAESVAVTL GPKGRNVVLE KKFGAPQIIN DGVTIAKEIE LEDHIENTGV ALIRQAASKT NDAAGDGTTT ATVLAHAMVK AGLRNVAAGA NAITLKKGID KATDFLVKKI QEQAKPISDS NAIAQCGTIA AGNDEEVGQM IASAMDKVGK EGVISLEEGK SMTTELEVTE GMRFDKGYIS PYFATDTERM EAVLDEPYIL LTDKKIGLVQ DLVPVLEQIA KTGKPLLIVA EDIEKEALAT LVVNRLRGVL NVAAVKAPGF GDRRKAMLED MAVLTNGQLI TEDAGLKLEN ATLEMLGTSR RVTINKDTTT IVAEGNEVAV KARCEQIKKQ MDETDSTYDK EKLQERLAKL AGGVAVVKVG AATETEMKDK KLRLEDAINA TKAAVEEGIV PGGGTTLAHL SPELQSWASN NLSGEELIGA NIVEAALTAP LMRIAENAGA NGAVIAEHVK NKPVNDGYNA ASGEYVDMLN AGIVDPAKVT RSGLQNAASI AGMVLTTECI VADLPEKKDA ASAGAGMGGD FDY
|
| |