| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_14521 |
|---|
| Symbol | |
|---|
| ID | 5730071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 1306606 |
|---|
| End bp | 1307271 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641285830 |
|---|
| Product | Short-chain dehydrogenase of various substrate specificities |
|---|
| Protein accession | YP_001551337 |
|---|
| Protein GI | 159903993 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00861762 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTCTACTT ACTTAATAAC AGGCTCTAAC CGAGGACTTG GATTAGAGTA CTGTCGGCAG
TTGAAAAAAA GAGGAGATAA TGTTATTGCA ACATGCAGGA CTTCATCTGC AGATTTAGAT
GATCTTGGTG TAAGAGTTGA ATCTGGAGTT GATATAACTT CAGGTGCATC AGTTCTAACG
CTTAAGAAAA AATTAGAAGG TATTAATATA GACATATTAA TTCAAAATGC TGGGATAGCA
GAGTTTAATT CTTTGTCAAA TCTTGACCCA CAAAGTGTTA CCCGCCAATT TGAAGTTAAT
GCATTGAGCC CTTTATGTTT TACTCATGCA TTTCTTGAAA ATATGAGTAA AGGTTCAAAA
GTTGTCTTTA TGACAAGTCG AATGGGATCT ATAGATGACA ATACTTCAGG GGGCTCTTAT
GGATACAGGA TGTCCAAAGT TGCGCTTTGT ATGGCTGGCA AATCTTTATC TATTGACTTA
AAGCCAAATG GCATAGCTGT TGCTCTCTTG CACCCTGGAT TGGTAAGTAC TCGAATGACA
GGTTTTACTC CCAATGGGGT GTCACCTCAG GAATCTGTAA TTGGCCTTCT TTCAAGGATT
GATTCATTGA CACTTGATAA TTCAGGAACT TTTTGGCATT CAAATGGGGA AGAACTCCCT
TGGTAA
|
|---|
| Protein sequence | MSTYLITGSN RGLGLEYCRQ LKKRGDNVIA TCRTSSADLD DLGVRVESGV DITSGASVLT
LKKKLEGINI DILIQNAGIA EFNSLSNLDP QSVTRQFEVN ALSPLCFTHA FLENMSKGSK
VVFMTSRMGS IDDNTSGGSY GYRMSKVALC MAGKSLSIDL KPNGIAVALL HPGLVSTRMT
GFTPNGVSPQ ESVIGLLSRI DSLTLDNSGT FWHSNGEELP W
|
|---|
| |