| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_14411 |
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| Symbol | |
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| ID | 5730798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1298330 |
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| End bp | 1300114 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641285818 |
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| Product | Flp pilus assembly protein TadD |
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| Protein accession | YP_001551326 |
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| Protein GI | 159903982 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00033533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATGGCT TTGGAGAAAA AAAAATTTCA AATAAAAAGA AATTCCACAA TCAGCTATCA
GAAGTCCAGA TTAATCAATT AATGACTGGA GCAATAAGGC ATCTTTCTTC CGGTAATTTT
GTTGACGCAG AGGCTTGCTA TATGAAATTA ATCAATGCAG GTTTTAAAGA TCCTAGAGTC
TACTCAAATA TCGGTGCTAT ATATAAACAA AGAAATAATC TTGACAAAGC ATGTTTTTAC
TTAAAAAAAG CAGTCACCTT ATTCCCAGAA TACGCTGATG CTTATTCTAA TTTAGCATTA
ATCCTAAAAG AGAAAGGTGA ATTAAAAGAA GCAGAGTTAT ATGCTAGAAA AGCGATCTCA
TTGAAACCTA ATTTATGTGA TGCATATTTA ATCCTAGGTG GAATTTTACA AGATCAAGGA
GATCTAGATC AAGCAATACT TTGTACAAGA AAGGCAATTA TATTGGACCC TAATTTGGCA
AGTTCACATC TCAACCTTGG TGTATTGCTA AAAGAAAAAG GCAATTTAAA AGAAGCTGAA
GATGCCACTA GAAAAGCAAT ATCATTGCAA TCAAACTTGG CAAACGCACA TCTCAACCTT
GGTGTATTGC TAAAAGAAAA AGGCAATTTA AAAGAAGCTG AAGATGCCAC TAGAAAAGCA
ATATCATTGC AATCAAACTT GGCAAACGCA CATCTTAATC TTGGAATTTT ATTAAAAGAC
CTTGGAAAGC TAAAAGAAGC AGAAAAAACT TTAATTAAAG CAATACAGAT AGACGGCTTG
CTCGCACCAG CGTATTACTC ATTATCAACA TTAACCGATT ATTCAAATGA GAGAGAGTTA
GAAGATAAAC TTTTTAAAAT AAATTTAGAT AATTTAGATA ATTTATCTTT TAAGATAGAT
TTATGTTTTG CAAGATCTAA TATTCTTCAT AAGAAAAATC TTTTTTTAGA AAGCTCTGAA
TATCTCAAAG AAGCCAATAA GATAAAGCTC CAATTATATC CATCTAATGC AAATAAGCAA
ATTAAAAAGT CTATTGAAAT TCTCGATAAA TATAAAGACT ATCAAGAAGA CATACCAGTA
ACAAGTCCAG TTTCGAATTG CATTTTCATT GTAGGAATGC CTCGCTCTGG TTCTACATTA
TTAGAGTCTA TTCTAAGTAT GAAAGAAAAA GTTGTTGACT TAGGAGAAAC AGTTATTTTT
GAACAAGCCT TTTCTGAATG GAATATGCAA GACAAGCAAT CCAAGGGGAA GAGTCTTTTT
GAAATCTATT ATGAAAAAAG GTCTTCTTTT GCAGAAAAGG AATGCATAAC AACAGATAAG
AATTTGTATA ACTATATGTA TTCTGGTTTT ATAGCTAGTC AATTCCCAGC AGCTAAGATT
ATTCATTGTT ATAGGAATCC TCTTGATAAT ATTCTTTCTA TGTATAGAGC AAATTTTGCA
AAAGGAAATT ATTACTCTTC ATCAATATTA GATTGCTCAA AAGTTCTTTC AAATCATATT
TATCTAATGA ATTATTATAA GAAATTATAC CCAGAAAAGA TTTATAGCCT AGATTATGAT
CAATTGGTTA TTTCACCAAA AGATCAAATC AGGTCTCTAA TAAATTGGTT GGGATGGGAA
TGGGAAGAAT TATATTTATC ACCTGACAAA AGTAATAGAG CAGTTAGTAC AGCAAGCAAT
GTGCAAGTAA GGTATCCTAT TAATAATAAA TCTCTTTATG GCTGGAAGAA ATATACAGAG
CTTTTAAAAC CAGCAATAGA TTATTTAGAC CAAAAAATCA TTTAG
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| Protein sequence | MNGFGEKKIS NKKKFHNQLS EVQINQLMTG AIRHLSSGNF VDAEACYMKL INAGFKDPRV
YSNIGAIYKQ RNNLDKACFY LKKAVTLFPE YADAYSNLAL ILKEKGELKE AELYARKAIS
LKPNLCDAYL ILGGILQDQG DLDQAILCTR KAIILDPNLA SSHLNLGVLL KEKGNLKEAE
DATRKAISLQ SNLANAHLNL GVLLKEKGNL KEAEDATRKA ISLQSNLANA HLNLGILLKD
LGKLKEAEKT LIKAIQIDGL LAPAYYSLST LTDYSNEREL EDKLFKINLD NLDNLSFKID
LCFARSNILH KKNLFLESSE YLKEANKIKL QLYPSNANKQ IKKSIEILDK YKDYQEDIPV
TSPVSNCIFI VGMPRSGSTL LESILSMKEK VVDLGETVIF EQAFSEWNMQ DKQSKGKSLF
EIYYEKRSSF AEKECITTDK NLYNYMYSGF IASQFPAAKI IHCYRNPLDN ILSMYRANFA
KGNYYSSSIL DCSKVLSNHI YLMNYYKKLY PEKIYSLDYD QLVISPKDQI RSLINWLGWE
WEELYLSPDK SNRAVSTASN VQVRYPINNK SLYGWKKYTE LLKPAIDYLD QKII
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