Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_13951 |
Symbol | nblS |
ID | 5730828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 1262329 |
End bp | 1264389 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641285771 |
Product | two-component sensor histidine kinase |
Protein accession | YP_001551280 |
Protein GI | 159903936 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0290244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.899353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAGTA CAGAATCTCA AACCATTATC GAAAAAAATC AAGTGAATCA GCAAAATGCC GTGAATGGTT TTTGGGGGGA GGTAAGTAGT TGGTGGGGGG AATTCAGTTT ACGCTCTAAG TTACTAGCAA TTGCAACTTT AGTTGTCAGT CTATTAATGA CAGGCATCAC ATTTTTTGCA TTAAGTAGTA TCCAGCGTGA TGCTGGTATG AATGACACTA GATATGCAAG AGATTTAGGT CTTCTACTTT CGGGAAATGT AACGGAATTA GTAGCAAAAG GGCAAGATAG AGAGTTATTT AATGTTGCCG AAAAATTCTG GAGATCAAGT AGAAATATTA GATATATATT TTTCACTGAT CCAGAGGGTA CTGTTCAATT AGGCATACCC ATTAGTGCTA CCCCAGACAA TACTAACAAT GACCTTCAAC TAACAAGAAA GCTTAAGCTA CCAAATGAAC TTAAGAAAAC GCCGCAGTTC CCTTTAGTTA GACAGCACCT AACCCCTCAA GGTCAAGTTA CTGATGTATT TGTTGCACTT CTTTTTAAAG GTAAATATGT AGGCAACCTT GCATTAGGAG TAACACCTAA TAAGACTGCA CTTGAGAGTG CTTCGCTTAC TAGAGAAATC ACTATTGCTG TATTTATATC AATATGGATA CTTGTCATCA TTGGCTCAGT ATTTAATGCA CTAACAATTA CACGTCCAGT AAGAGAACTT CTTGTTGGTG TTAAGGAAAT AGCGCAAGGA AATTTTAAAT CTCGAATTGA TCTTCCTATG AGAGGAGAAC TAGGCGAACT CTTGAATGGA TTTAATGCTA TGGCTTCACA ACTTGAAGAC TATGATGCTG CAAATATTGA AGAGTTAAAA TCAGCCCAAG TTAAACAGCA ATCTCTTATT GCAACTATGG CAGATGGTGC AATATTACTA GACCAAGAGG GTAGGATAGT ATTGGTTAAT GCTACTGCAA GAAGATTTTT TCGTTGGGAA GGGCGTAATC TTGAAGGGCA GGAACTAATT GATGAATTAC CAGAAATAAT TGCTAATGAT TTACAACCAA CTCTAGTTTC TATTAGAAAT AATGTTTTAG AAAACTATGA CCTTAGATGT AACATCGATG AACCTTCAAG GACTCTAAGA ATTGTAATGC AATCAGTTCG AGACTCTACT GGTTCAAATC TAAAAGGTGT TGCAGTAACC ATCCAGGATT TAACCAGAGA GGTAGAACTT AATGCTGCTC AAAGTCGTTT TATTAGCAAT GTATCTCATG AATTAAGAAC ACCATTATTT AATATCAAGA GCTACGTTGA GACGCTACAT GATCTCAATG ATAAACTTAC CGAAGAAGAA AAGATAGAGT TCCTTGGTAT TGCGAATTCG GAAACAGACA GATTAACTCG ATTAGTAAAT GATGTACTAG ATCTATCAAA ACTTGAAACA AGCCCAAAGG TTAAATTTGA AAAGCTAAAT ATCGATCCTG GGATAGAACA AACTCTTCGA AATTATAAAT TAAACGCCGA AGACAAGAAA GTAGATCTCT GTCATGAAAT TGAAGAAAAT TTACCTTCAA TCCTTGGAAA CTGGGATATG CTTTTACAAG TATTAGACAA CTTGGTAGGT AACGCACTGA AATTTAGTAG ACGTAGCGGA AAGTTAATGA TCAGAGCCTA TACATGGCCA GACATATGTA TAACTTCTTT TAAGAATAAA TCTAATGATG CCCCCTGCTG TGATGTGATT TCACCCCTCC CAAGAGTTCG TGTTGAAATA TCGGATACAG GCTGCGGTAT ATCGAGAGAA GATCAACTGA AAATCTTTGA GAGATTCTAT CGAGTAGAAA ATTCTGTCCA TACTGAAGCT GGGACTGGTC TTGGGTTATC GATAGTTAAA GGCATCCTAG GAAAGCATGG CAGCCAAATC CGAATGGCAA GTGAGCCCGA AATAGGAACA ACTTTTTGGT TTGATCTTCC GCTTTCCGAA AGTGATGAGG ATGAACTATT AATTGAATCA GAAAAGAAAG CTCGTGAATG GGAAAAAAGC CTGGAGGAAG AATTAAATTA A
|
Protein sequence | MESTESQTII EKNQVNQQNA VNGFWGEVSS WWGEFSLRSK LLAIATLVVS LLMTGITFFA LSSIQRDAGM NDTRYARDLG LLLSGNVTEL VAKGQDRELF NVAEKFWRSS RNIRYIFFTD PEGTVQLGIP ISATPDNTNN DLQLTRKLKL PNELKKTPQF PLVRQHLTPQ GQVTDVFVAL LFKGKYVGNL ALGVTPNKTA LESASLTREI TIAVFISIWI LVIIGSVFNA LTITRPVREL LVGVKEIAQG NFKSRIDLPM RGELGELLNG FNAMASQLED YDAANIEELK SAQVKQQSLI ATMADGAILL DQEGRIVLVN ATARRFFRWE GRNLEGQELI DELPEIIAND LQPTLVSIRN NVLENYDLRC NIDEPSRTLR IVMQSVRDST GSNLKGVAVT IQDLTREVEL NAAQSRFISN VSHELRTPLF NIKSYVETLH DLNDKLTEEE KIEFLGIANS ETDRLTRLVN DVLDLSKLET SPKVKFEKLN IDPGIEQTLR NYKLNAEDKK VDLCHEIEEN LPSILGNWDM LLQVLDNLVG NALKFSRRSG KLMIRAYTWP DICITSFKNK SNDAPCCDVI SPLPRVRVEI SDTGCGISRE DQLKIFERFY RVENSVHTEA GTGLGLSIVK GILGKHGSQI RMASEPEIGT TFWFDLPLSE SDEDELLIES EKKAREWEKS LEEELN
|
| |