Gene P9211_13951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_13951 
SymbolnblS 
ID5730828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1262329 
End bp1264389 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content37% 
IMG OID641285771 
Producttwo-component sensor histidine kinase 
Protein accessionYP_001551280 
Protein GI159903936 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0290244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.899353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTA CAGAATCTCA AACCATTATC GAAAAAAATC AAGTGAATCA GCAAAATGCC 
GTGAATGGTT TTTGGGGGGA GGTAAGTAGT TGGTGGGGGG AATTCAGTTT ACGCTCTAAG
TTACTAGCAA TTGCAACTTT AGTTGTCAGT CTATTAATGA CAGGCATCAC ATTTTTTGCA
TTAAGTAGTA TCCAGCGTGA TGCTGGTATG AATGACACTA GATATGCAAG AGATTTAGGT
CTTCTACTTT CGGGAAATGT AACGGAATTA GTAGCAAAAG GGCAAGATAG AGAGTTATTT
AATGTTGCCG AAAAATTCTG GAGATCAAGT AGAAATATTA GATATATATT TTTCACTGAT
CCAGAGGGTA CTGTTCAATT AGGCATACCC ATTAGTGCTA CCCCAGACAA TACTAACAAT
GACCTTCAAC TAACAAGAAA GCTTAAGCTA CCAAATGAAC TTAAGAAAAC GCCGCAGTTC
CCTTTAGTTA GACAGCACCT AACCCCTCAA GGTCAAGTTA CTGATGTATT TGTTGCACTT
CTTTTTAAAG GTAAATATGT AGGCAACCTT GCATTAGGAG TAACACCTAA TAAGACTGCA
CTTGAGAGTG CTTCGCTTAC TAGAGAAATC ACTATTGCTG TATTTATATC AATATGGATA
CTTGTCATCA TTGGCTCAGT ATTTAATGCA CTAACAATTA CACGTCCAGT AAGAGAACTT
CTTGTTGGTG TTAAGGAAAT AGCGCAAGGA AATTTTAAAT CTCGAATTGA TCTTCCTATG
AGAGGAGAAC TAGGCGAACT CTTGAATGGA TTTAATGCTA TGGCTTCACA ACTTGAAGAC
TATGATGCTG CAAATATTGA AGAGTTAAAA TCAGCCCAAG TTAAACAGCA ATCTCTTATT
GCAACTATGG CAGATGGTGC AATATTACTA GACCAAGAGG GTAGGATAGT ATTGGTTAAT
GCTACTGCAA GAAGATTTTT TCGTTGGGAA GGGCGTAATC TTGAAGGGCA GGAACTAATT
GATGAATTAC CAGAAATAAT TGCTAATGAT TTACAACCAA CTCTAGTTTC TATTAGAAAT
AATGTTTTAG AAAACTATGA CCTTAGATGT AACATCGATG AACCTTCAAG GACTCTAAGA
ATTGTAATGC AATCAGTTCG AGACTCTACT GGTTCAAATC TAAAAGGTGT TGCAGTAACC
ATCCAGGATT TAACCAGAGA GGTAGAACTT AATGCTGCTC AAAGTCGTTT TATTAGCAAT
GTATCTCATG AATTAAGAAC ACCATTATTT AATATCAAGA GCTACGTTGA GACGCTACAT
GATCTCAATG ATAAACTTAC CGAAGAAGAA AAGATAGAGT TCCTTGGTAT TGCGAATTCG
GAAACAGACA GATTAACTCG ATTAGTAAAT GATGTACTAG ATCTATCAAA ACTTGAAACA
AGCCCAAAGG TTAAATTTGA AAAGCTAAAT ATCGATCCTG GGATAGAACA AACTCTTCGA
AATTATAAAT TAAACGCCGA AGACAAGAAA GTAGATCTCT GTCATGAAAT TGAAGAAAAT
TTACCTTCAA TCCTTGGAAA CTGGGATATG CTTTTACAAG TATTAGACAA CTTGGTAGGT
AACGCACTGA AATTTAGTAG ACGTAGCGGA AAGTTAATGA TCAGAGCCTA TACATGGCCA
GACATATGTA TAACTTCTTT TAAGAATAAA TCTAATGATG CCCCCTGCTG TGATGTGATT
TCACCCCTCC CAAGAGTTCG TGTTGAAATA TCGGATACAG GCTGCGGTAT ATCGAGAGAA
GATCAACTGA AAATCTTTGA GAGATTCTAT CGAGTAGAAA ATTCTGTCCA TACTGAAGCT
GGGACTGGTC TTGGGTTATC GATAGTTAAA GGCATCCTAG GAAAGCATGG CAGCCAAATC
CGAATGGCAA GTGAGCCCGA AATAGGAACA ACTTTTTGGT TTGATCTTCC GCTTTCCGAA
AGTGATGAGG ATGAACTATT AATTGAATCA GAAAAGAAAG CTCGTGAATG GGAAAAAAGC
CTGGAGGAAG AATTAAATTA A
 
Protein sequence
MESTESQTII EKNQVNQQNA VNGFWGEVSS WWGEFSLRSK LLAIATLVVS LLMTGITFFA 
LSSIQRDAGM NDTRYARDLG LLLSGNVTEL VAKGQDRELF NVAEKFWRSS RNIRYIFFTD
PEGTVQLGIP ISATPDNTNN DLQLTRKLKL PNELKKTPQF PLVRQHLTPQ GQVTDVFVAL
LFKGKYVGNL ALGVTPNKTA LESASLTREI TIAVFISIWI LVIIGSVFNA LTITRPVREL
LVGVKEIAQG NFKSRIDLPM RGELGELLNG FNAMASQLED YDAANIEELK SAQVKQQSLI
ATMADGAILL DQEGRIVLVN ATARRFFRWE GRNLEGQELI DELPEIIAND LQPTLVSIRN
NVLENYDLRC NIDEPSRTLR IVMQSVRDST GSNLKGVAVT IQDLTREVEL NAAQSRFISN
VSHELRTPLF NIKSYVETLH DLNDKLTEEE KIEFLGIANS ETDRLTRLVN DVLDLSKLET
SPKVKFEKLN IDPGIEQTLR NYKLNAEDKK VDLCHEIEEN LPSILGNWDM LLQVLDNLVG
NALKFSRRSG KLMIRAYTWP DICITSFKNK SNDAPCCDVI SPLPRVRVEI SDTGCGISRE
DQLKIFERFY RVENSVHTEA GTGLGLSIVK GILGKHGSQI RMASEPEIGT TFWFDLPLSE
SDEDELLIES EKKAREWEKS LEEELN