| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_13651 |
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| Symbol | wcaJ |
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| ID | 5730910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 1234572 |
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| End bp | 1235243 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641285740 |
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| Product | lipopolysaccharide synthesis sugar transferase |
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| Protein accession | YP_001551250 |
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| Protein GI | 159903906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0197235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTAG ATCAACAATT TTCCCAAGAT GATCAGATCA TAAGAAAGAA CTATTATTAC
AGGTCTATAA AAAGATTTGC AGATATTATT TTTTCTCTAT CAATTTTGCT AGTAGGGTTT
CCATTCTTTC TTTTGTTTGC TTTATTGGTC AAGCTAAGTT CTGTTGGCCC TGTTTTCTAT
GTTCAGGAAA GAGTTGGTCG AAACTTTTCT AGATTTGGTT GTATAAAGTT TCGTACAATG
CATCCTGAAG CAGAAGATAT ATTAAATAAT TTACTTGAAG AGAACTCACT TTTAAAGGAA
GAGTTTCAAA AGGATTTTAA ATTAAGAAAT GATCCTAGAA TAACATCAAT TGGCAAATTT
CTTAGGAGAA CTAGCCTTGA CGAATTACCA CAATTTTTTA ATGTTCTAAG AGGTGAAATG
AGTGTTGTGG GACCAAGGCC AATTGTTCCA GAAGAGGTAG AGCGCTACGG AGAATTTATG
GAGGAAGTTA ACTCAGTAAG ACCAGGAATA ACAGGCTTGT GGCAAATCAG TGGAAGAAAT
AACCTAAGTT ATAAAAGACG CATTAGCTTA GACCTTGTAT ATGTAAGACA AAAGAATATT
TGGATGGACT TTAGAATAAT TATGCGTACA TTTTTTGTAT TATTATTTCC TATTGATAGA
GGTGCATACT AG
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| Protein sequence | MALDQQFSQD DQIIRKNYYY RSIKRFADII FSLSILLVGF PFFLLFALLV KLSSVGPVFY
VQERVGRNFS RFGCIKFRTM HPEAEDILNN LLEENSLLKE EFQKDFKLRN DPRITSIGKF
LRRTSLDELP QFFNVLRGEM SVVGPRPIVP EEVERYGEFM EEVNSVRPGI TGLWQISGRN
NLSYKRRISL DLVYVRQKNI WMDFRIIMRT FFVLLFPIDR GAY
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