| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_13641 |
|---|
| Symbol | cbiB |
|---|
| ID | 5730725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 1233586 |
|---|
| End bp | 1234575 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641285739 |
|---|
| Product | putative cobalamin biosynthetic protein |
|---|
| Protein accession | YP_001551249 |
|---|
| Protein GI | 159903905 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00725389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGCAG TTTTATTAGA TTTAGCTGCA GGAGATCCCA AAAAGCTTCC CCATCCAGTA
GTTTTTATGG GCTACTTAAT CAACTTTTTA CAAAAAAAAG TTGAATCATT TGCTGAGGAA
AATATCCTTA GTTTACGCTT AGGCGGAGTA TTAATAACTT TTATAGTATT TACTACTGCA
GGCCTCAGTG GCTGGATGAT TGAGCGATTA GCTTACAAAG AATCATTTTT TCCTATTTTA
TTTAATAATT CAATTCTTAT AATTTCTTTA GCAAGTTGCT TGTCAGCCCG AAGTCTTTAT
GACAGCATTT TGAGAGTGAT TAATAGTTTA AACAATCAAT CTTCTGAAGA ATCTATAGAA
GCTGCACGTA AAGAGCTTGG TTATATTGTT GGTCGAGATG TTGATCAATT AGAAAAGCAA
GAAATACTAA GAGCGACTGC AGAAACTGCT AGCGAAAATG CTGTTGATGG AGTTTTTGCT
CCTCTATTTT GGATGGCAAC TGGTATTTTA CTTTGGAACA TCTCTCCTAA TTTGCCAGGT
CCATTAGCAT GTGCTTTTGC ATTTAAATCT GCTAGCACAA TGGATTCCAT GCTGGGTTAT
CGTGAAGGTA ATTTAAGATG GCTTGGCACA GCAAGTGCTC GATTAGATGA CATTTTGACT
TTTATTCCTT GCAGATTAGT ATTGCTTTCA CTGCCTTTGG TAAGTCGTCC ATTAAATGAA
TTACCTAATC TTGTGAAAGG TGCTTTTGAA GATGGTTCAA AAGATTTATC TCCTAATTCC
GGTTTATCAG AAGCAATCTT TGCTTACTGT GCGGGAATAA AGATGGGTGG AGCAAACTTA
TATAAAGGGA AGCTAATATA TAAACCAATA CTTTCTAAAT ATTCACCAGA AGCAAACAAA
GAAGGTATTT ACAATATCCT AAAGATTGGA TTTTATCTGG AAATGCTTTG GCTAATCTCA
ATAATGACTA TTTCAATAAC ATTCAACTAG
|
|---|
| Protein sequence | MAAVLLDLAA GDPKKLPHPV VFMGYLINFL QKKVESFAEE NILSLRLGGV LITFIVFTTA
GLSGWMIERL AYKESFFPIL FNNSILIISL ASCLSARSLY DSILRVINSL NNQSSEESIE
AARKELGYIV GRDVDQLEKQ EILRATAETA SENAVDGVFA PLFWMATGIL LWNISPNLPG
PLACAFAFKS ASTMDSMLGY REGNLRWLGT ASARLDDILT FIPCRLVLLS LPLVSRPLNE
LPNLVKGAFE DGSKDLSPNS GLSEAIFAYC AGIKMGGANL YKGKLIYKPI LSKYSPEANK
EGIYNILKIG FYLEMLWLIS IMTISITFN
|
|---|
| |