Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_13581 |
Symbol | panB |
ID | 5731664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 1227857 |
End bp | 1228627 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641285733 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001551243 |
Protein GI | 159903899 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCAA AGGAATTAGC TCTACTTAAA GAGCTAGGAA AACCAATCAC AGTCCTTACT GCATGGGATA GCTTGTCATC GGCAATTGTT GAGGCTGCAG GAGCAGATGT TGTACTAGTA GGAGATTCCT TGGCCATGTT TGTTCATGGT CATACATCAA CATTACCTGT AACACTTGAG CAAATGCTCC TTCATGCACA GGCTGTAGGG AGAGGTTTCG TTAATCCAGC CGAAAAACAA CCTTTAGTTG TGTGTGATCT GCCCTTCCTA AGTTTTCAAT GCGGAGAAGA TAGAGCCGTT TCAGCTGCAG GGACTTTACT AAAGCACTCA TGTACTTCTG CTGTAAAAAT TGAAGGTGCC GAACCGGAAG TTCTAAAAGT TATCGAACGT TTAATAAGAA TGGGAATACC TGTAATGGGA CATCTTGGAT TGACGCCTCA ATCAGTTAAC AATCTTGGTT ATCGAAAACA AGCCGAAGAT CCAATCAGTC AAAAAAAAAT CATGCGTCAG GGTATTCAAT TAGAGGAAGC TGGATGCTTT GCAATAGTTT TAGAGCATGT TCCAGAGACG CTTGCTCTTC AATTGAAAAG CAAACTAAGA GTTCCTGTCA TCGGAATAGG CGCTGGTGAA AACTGCGATG GACAAGTAAG AGTGACAGCT GACTTACTTG GTCTTACGAA AAAACAACCA CCTTTTAGCA AGCCCCTTAT AAAAGGACGG GAAATATTTG TTGGTGCTCT TAAAAACTGG GTTGAGCAAC AGCGGACTTA G
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Protein sequence | MIPKELALLK ELGKPITVLT AWDSLSSAIV EAAGADVVLV GDSLAMFVHG HTSTLPVTLE QMLLHAQAVG RGFVNPAEKQ PLVVCDLPFL SFQCGEDRAV SAAGTLLKHS CTSAVKIEGA EPEVLKVIER LIRMGIPVMG HLGLTPQSVN NLGYRKQAED PISQKKIMRQ GIQLEEAGCF AIVLEHVPET LALQLKSKLR VPVIGIGAGE NCDGQVRVTA DLLGLTKKQP PFSKPLIKGR EIFVGALKNW VEQQRT
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