| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_13361 |
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| Symbol | |
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| ID | 5730813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 1204023 |
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| End bp | 1204964 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641285707 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001551221 |
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| Protein GI | 159903877 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.104239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCAT CTGCACCCAA GGCGGCTGAA TCACAAAAGC GACGTAGTAG TGACCCAATA
AGTTGGTACT TATCAACAAT TGGGAGGGTT CCACTTCTTA CTCCTGCTGA GGAAATTGAG
TTAGGCAATC AGGTTCAGGT AATGATGAAC TTGACCGAAG ACGGGAGTAT TGATGTAAAG
AGTGAGGAGT TCACATCTCA TCAGCGACGT TTAATTAGAA TTGGTCGTAG GGCTAAAGAG
AGGATGATGA AGGCCAATCT CAGGCTGGTA GTTAGTGTTG CTAAGAAATA TCAGGGTAAA
GGGCTCGAGT TGCTTGATCT TGTTCAAGAA GGATCTTTAG GCTTAGAAAG AGCTGTGGAG
AAGTTTGACC CTACGAGAGG ATATAAATTC TCAACTTATG CTTTTTGGTG GATTAGACAG
AGCATGACTA GGGCTATAGC TTGTCAGTCA AGAACTATTA GGCTTCCAGT TCATTTAAGT
GAACGTCTTG CAACTATAAG AAAAATCAGC TCAGACTTGG CTCATAAATT AGGAGCAATG
CCAAGTAGGG CTGAGCTTGC AGAAGCTATG GAAATTGATG CTGAAGAGCT AGATTCCATT
CTGCGCCAAG CTCTTACAAC AAGTAGTTTA GATGCACCAG TAAATGGTGA TGACGGACGT
AGTTTCTTGG GGGATTTGAT TGCTGACTCT TCTTTAGAAG AACCGTTAGA TAAAGTTGAG
CAACGTATTC ATCAAGAGCA ACTTGGTAGA TGGTTGACAC ACCTAAGTGA GCAAGAACAG
CATGTTCTTA AACTTAGATT TGGCTTAGAA GGAAATGAAA GACATACTCT TGCTGAGATT
GGACGTTTGT TACAAGTCTC TAGAGAGAGA GTAAGGCAAG TTGAATTGAA GTCCCTTCGA
AAATTACGCA ATCTGACTAG GAAACTTCCA AGTGGTATAT AA
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| Protein sequence | MVSSAPKAAE SQKRRSSDPI SWYLSTIGRV PLLTPAEEIE LGNQVQVMMN LTEDGSIDVK
SEEFTSHQRR LIRIGRRAKE RMMKANLRLV VSVAKKYQGK GLELLDLVQE GSLGLERAVE
KFDPTRGYKF STYAFWWIRQ SMTRAIACQS RTIRLPVHLS ERLATIRKIS SDLAHKLGAM
PSRAELAEAM EIDAEELDSI LRQALTTSSL DAPVNGDDGR SFLGDLIADS SLEEPLDKVE
QRIHQEQLGR WLTHLSEQEQ HVLKLRFGLE GNERHTLAEI GRLLQVSRER VRQVELKSLR
KLRNLTRKLP SGI
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