| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_13271 |
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| Symbol | trmD |
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| ID | 5730708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 1194615 |
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| End bp | 1195325 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641285698 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001551212 |
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| Protein GI | 159903868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.78651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGTAT ATCGTTTTGA TGTTATAAGC CTTGCTCCAG AAGCATTCTC GAGTTTTAAA
GAACTTGGTG TGGTTGGCAG GGCATTTTCA TCTGGAATAG CGGAATTGCA TGTTCATAAC
CCCCGAGAGT TTGCTTATGA CAACTATCGA AAAGTAGATG ACCAACCTTA TGGAGGTGGT
GCAGGCATGG TTCTTAAGCC AGAACCTTTT TTTGCTGCTT TTGATTCGGT TCCTTTTTCT
TTAAAGAGGA GAGTTTTGTT AATGAGTCCT CAAGGTCAAA CTCTTTCACA AGAAAAACTT
TGGCGCTGGT CAGAAGAGTA CAAACAACTT GTTTTGATTT GTGGCCATTA TGAGGGCTTT
GATGAACGGA TTAGAACTAT TGCTGACGAA GAGGTATCTA TAGGTGATGT TGTTTTAACT
GGAGGAGAGC TGCCTGCAAT GACAGTTGTA AATGGTGTGG TTCGTTTGCT TCCTGGGACT
GTTGGGGATC CTCAGTCATT GATTGAGGAA AGTCACTCGG ATATTCTTCT TGAGCACCCG
CATTACACAC GCCCAGCAAA ATTTCGTGGG ATGGAAGTTC CCTCAGTCTT GCGTAGTGGT
AATCATCAAG CAATCTCTAA ATGGAGACAA GATCAAAGAG AGCTTCGTAC GAAATATCGT
CGACCAGATC TTTATGATCG TTGGCTTTCC AAAAAGTCAT CAGATACTTA A
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| Protein sequence | MTVYRFDVIS LAPEAFSSFK ELGVVGRAFS SGIAELHVHN PREFAYDNYR KVDDQPYGGG
AGMVLKPEPF FAAFDSVPFS LKRRVLLMSP QGQTLSQEKL WRWSEEYKQL VLICGHYEGF
DERIRTIADE EVSIGDVVLT GGELPAMTVV NGVVRLLPGT VGDPQSLIEE SHSDILLEHP
HYTRPAKFRG MEVPSVLRSG NHQAISKWRQ DQRELRTKYR RPDLYDRWLS KKSSDT
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