| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_13081 |
|---|
| Symbol | |
|---|
| ID | 5731536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 1182338 |
|---|
| End bp | 1183435 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641285679 |
|---|
| Product | putative diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase |
|---|
| Protein accession | YP_001551193 |
|---|
| Protein GI | 159903849 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.397448 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAGATTTGAA TATTGAAGAA TGCTTTTATT GGATGCAACG TGCATTCCAA
TTGGCTCAAT TGGCAGATGG TGAGACAAAT CCGAATCCAT TAGTAGGAGC AGTGGTTCTT
GATCCTGACA AGCTCTTGAT AGGAGAAGGT TTTCATTCAA AAGCTGGTAG TCCACATGCT
GAAGTAGAGG CTTTACGGCA AGCTGGTGAT GCGGCAAAGG GAGGGACTCT TTTAGTTACT
CTTGAGCCTT GTTGCCATTA TGGGTTAACG CCACCTTGCA CTAAAACTAT TATTGAGTCC
GGGGTCTCAA GAGTAGTTGT TGGCTTGCAA GACCCTGATC CAAGAGTGTC AGGGAATGGC
ATACGTTTGT TAAAGGAAGC TGGTATAGAA GTAATTACTG GAATTCTGAA AGAAGAAATT
TCATTTCAGA ATAGGGCCTT CATTTTTAGA ATTAAAACAG GTAGGCCTTG GGGCATACTG
AAATTAGCAA TGAGTTTTGA TGGTCGAACT GGTTTATCTA ATGGGAAAAG TAAATGGATA
ACTTCACAAG AAGCAAGAGA AAAGGTCCAT GCTCTTAGAG CCAAGTGTGA TGCTGTAATT
ATCGGTGGGG GTACCCTTAG AGCCGATGAC CCTCTTTTGA CTAGTAGAGG TTTAAGAAAT
CCTGAGCCTT TAAGAGTTGT TTTTAGTCAA AGCCTTTCCT TGCCCATTGG CGCTCAAATT
TGGAGGACTG AAAGTGCAAA AACCCTTGTT GCTTTCAGTA ATGAAAACGC ATTACCGCTT
ATTCAGGAAT TGCCTGAAAA TGTAGAAAAA CTAAAACTTC ACGAAAGTAA TCCAAGAGAA
TTGCTTGAAG AACTTGCAAA AAAAGGCTGC AACAGAATTT TGTGGGAATG CGGCCCCTCT
TTGGCTACCA GTGCAATAAA GCAAAATTGT GTTCAAGAGA TTGTTATTTT TATGGCCCCT
AAATTGTTAG GGGGCTTGCC TGCAATGACT CTCCTTGGAA ATTTCGGCTT TGATTCTTTG
GACCAGGCCC TGATCTTAAA AGAAGTTTCT TTGGCAAAAA GTGGTAAAGA TTTTGTATTA
AATACTTTTT TGGAATAG
|
|---|
| Protein sequence | MTKKDLNIEE CFYWMQRAFQ LAQLADGETN PNPLVGAVVL DPDKLLIGEG FHSKAGSPHA
EVEALRQAGD AAKGGTLLVT LEPCCHYGLT PPCTKTIIES GVSRVVVGLQ DPDPRVSGNG
IRLLKEAGIE VITGILKEEI SFQNRAFIFR IKTGRPWGIL KLAMSFDGRT GLSNGKSKWI
TSQEAREKVH ALRAKCDAVI IGGGTLRADD PLLTSRGLRN PEPLRVVFSQ SLSLPIGAQI
WRTESAKTLV AFSNENALPL IQELPENVEK LKLHESNPRE LLEELAKKGC NRILWECGPS
LATSAIKQNC VQEIVIFMAP KLLGGLPAMT LLGNFGFDSL DQALILKEVS LAKSGKDFVL
NTFLE
|
|---|
| |