Gene P9211_12981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12981 
Symbol 
ID5731886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1172372 
End bp1173109 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content32% 
IMG OID641285668 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_001551183 
Protein GI159903839 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.149409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTA GATCAGGCCT AGGAATCTGG CAAATACTTT CTTCTGAGCT AATTACGGAT 
ATTATTGGCA AGTCAGGCTT TGATCTTTCC ATATTAGATT TAGAACATGG TCTGCATGAC
CATCAAACTG TTCAAAAATG TCTTTTTGCT GCACAATCTA ATAACTTGCT TACAATTGTT
AGAGTACCTT CTATAAACTA TCCATATTTG AATCAACTTG TTGATTCAGG TGTTGATGGA
ATACTTTTCC CACATATTGA AAATACATCA CAAATAGATA GTTTAAAAAG TAATGCTCTG
TTATACCCTG CAGGTAATAG AAGTTTCAGT CCATTTGTCC ATAGATTTTC TTATGGGAAA
GCATCACCTG CTAAAGACCA TAATCCTAAT ATAGGAATTC TGATTGAATC TTTAAAGGGT
ATTAAATCAT CAGATGATTT ATTAGCTGAT TCTTATATTG ATTTTGTATA TTTTGGAGCA
TATGATATTT CGGTTGAGCT ATCTTGCAAG GGAGATATCT TCTCTGAACC TGTTATTAAC
CAACTTAGAG AATTATTAAA ACTTTCAAAG CATTATAAAA AGAAAATGCT TGCTATTTAC
AGGACATTGG ATGAGTTGAA GATCTTATTG GAACTAGGAG TACAATATCC TATCGCCTCT
GTAGATACAT CGAAATTCTT TAACTCATTG AATAGTGATG TAATTGAATA TACTAGTATA
ATGAGGGATT ACTGCTGA
 
Protein sequence
MTFRSGLGIW QILSSELITD IIGKSGFDLS ILDLEHGLHD HQTVQKCLFA AQSNNLLTIV 
RVPSINYPYL NQLVDSGVDG ILFPHIENTS QIDSLKSNAL LYPAGNRSFS PFVHRFSYGK
ASPAKDHNPN IGILIESLKG IKSSDDLLAD SYIDFVYFGA YDISVELSCK GDIFSEPVIN
QLRELLKLSK HYKKKMLAIY RTLDELKILL ELGVQYPIAS VDTSKFFNSL NSDVIEYTSI
MRDYC