Gene P9211_12841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12841 
Symbol 
ID5731578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1158368 
End bp1159405 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content37% 
IMG OID641285654 
Productputative nucleotide sugar epimerase 
Protein accessionYP_001551169 
Protein GI159903825 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.363741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0780964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCTT TCTCAAGACC TTTTTTAGTT ACAGGTGCAG CGGGATTTAT TGGAGCAGCT 
TTAGTAAAAA AGCTGCTTAA AAATGGAGAA AAAGTAATTG GTATAGACGA TTTAAATTCT
TATTATGATC CTGGCTTAAA ACAAGCAAGA CTTGATGAGA TTCAGAAAAT ATTAAAACCT
TCTTCAAGTG AATGGGCTTT TTACAAAATT GGTTTAGAAG ATATGGATTC TTTAAGGGAA
CTATTTCTCG AAAAATCACC TTCGGTTGTG GTTAACCTTG CAGCGCAGGC AGGAGTTAGG
TATTCAATAG AAAACCCATC TGCATATCTC AATAGTAATT TGGTTGGATT TTTCAATATT
CTAGAACTTT GTCGTCATCA TTCCGTTGAA AATTTGATAT ATGCTTCAAG CAGCTCTGTT
TATGGAGGTA ATAGGAATCT ACCTTTTGTG GAAACTCAGC CAGTTAATCA TCCTGTAAGT
TTCTATGCAG CTACAAAAAA ATCTAATGAG TTGATGGCTC ATTCATATAG TCATCTTTAT
AAAATTCCTG CCACAGGTTT AAGGTTCTTC ACAGTATATG GCCCATGGGG CAGACCTGAC
ATGGCTCCAA TGATTTTTGC TAAAGCAATT TTTTCTGGGA AGCCGATCAA CATTTATAAC
CAAGGGGAGA TGCTTAGGGA TTTCACTTAT ATAGATGATA TAGCTGAGTC GCTACTTCGT
TGTTGTTACA AGCCAGCTAC TCCGAATTCT AATTTCGACT CATTGAACCC TGACCCTTCA
AGTTCTTTGG CTTCGCATCG CATTTTTAAT ATAGGAAACA GTGAGCCAAT AGAGCTTTTA
AGGTTTATTG AATTATTAGA AGACTCTTTA GGCATAAGGG CCATTAAAAA TATGCTGCCT
ATGCAGCTTG GAGATGTAGT TGCAACTGCT GCTGATACAA ATTTACTTGA AAAGTGGATA
GATTTTAGGC CAAGAACATC TATAGAAGAG GGAGTCAAGA TGTTTACAAA ATGGTATCGC
GACTTTTATA AATGCTGA
 
Protein sequence
MPSFSRPFLV TGAAGFIGAA LVKKLLKNGE KVIGIDDLNS YYDPGLKQAR LDEIQKILKP 
SSSEWAFYKI GLEDMDSLRE LFLEKSPSVV VNLAAQAGVR YSIENPSAYL NSNLVGFFNI
LELCRHHSVE NLIYASSSSV YGGNRNLPFV ETQPVNHPVS FYAATKKSNE LMAHSYSHLY
KIPATGLRFF TVYGPWGRPD MAPMIFAKAI FSGKPINIYN QGEMLRDFTY IDDIAESLLR
CCYKPATPNS NFDSLNPDPS SSLASHRIFN IGNSEPIELL RFIELLEDSL GIRAIKNMLP
MQLGDVVATA ADTNLLEKWI DFRPRTSIEE GVKMFTKWYR DFYKC