Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_12751 |
Symbol | serS |
ID | 5730744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 1148823 |
End bp | 1150151 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641285644 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001551160 |
Protein GI | 159903816 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00611136 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGAGC TAGGCCAGCA TCAATTAAGC TTGGTTAAAA AAATAGTGCT TGACCAGCGC CTTATCAGGG AAAATCCCAA ACTAATTATC GAGGGCTTAC AAACTCGGGG AATACAAGTT GATCTTGGAG ATTTACAGCT AGATATTGAA AAGCTAAAGC AAATAGAGCA ACAAAGGAAT CTTCTTCAGG CTGAAGGTAA TGAGATAGGG AAAGAAGTTG GTCAAAAAAT CAGAAGTGGT CTTGACCCAA GTTCTCCAGA AATAGAATTA CTTCGCAGCA GTGGTAATAC GGTCAAAAAG AAAGTTAATG AATTAGAAGA GCTTGAGAAG GCTATCTCAG AAAAAATTAC TGAAGAAATT CTTCATTTAC CAAATATTCC TGACAAAGAG TGTCCTATAG GTAAAAACGA AACGGACAAT GTAGAAGTTC GTTCTTGGGG CGAACCTTTA GAAAGTAAAG CCTATAAAGA ACATTGGGAA ATTGCAGAAG AGCTTCAACT TTTAGATACT CAAAGGTCAG TAAAAATAGC TAAAAGTAGA TTTGTCACTC TATTAAATCA AGGGGCCCGC CTTGAAAGGG CATTGATTAA TTTCATGCTA GATATGCATT CAAAAAAAGG ATATTTAGAA GTTCTTCCGC CGGTTTTAGT AAATACAGCC AGCCTGACTG CATCTGGACA ATTACCAAAA TTCTCTGAGG AAAGCTTTAG ATGTGCTGAA GATGATCTCT GGCTCACTCC AACTGCTGAA GTTCCTCTAA CTTCATTACA TAGAGGTGAA ATAATTCCAT CTGAAGAATT ACCAATTAAA TACGTTGCTT ACACCCCTTG TTTCAGAAGA GAAGCTGGTA GTTATGGTAG AGATACAAGA GGGTTAATAA GACTTCATCA ATTCAATAAA GTCGAGCTCT TTTGGTTTGT ACATCCTGAG AAATCACCAG CTGCTCATGA ACAAATAACA AAAGACGCAG AGTCTATTCT TCAAGCTTTA GAACTACCTT ATCGAGTCCT AGAGCTATGC ACGGGAGATC TTGGATTCTC AGCATCACGA ACATATGACT TAGAAGTTTG GCTCCCAGGA GCCAATGCTT ACAGGGAAAT CTCAAGCTCT AGTATCTGTA ATGATTTCCA AGCAAGAAGA TCTTCAATTA GAACAAAAGA AGGCAAAAAA AGTCGACTGG TCCATACTCT TAACGCTAGT GGTCTTGCGA TAGGAAGAAC AATGGCTGCA ATATTAGAAA ATGGCCAAAA CCTGGATGGG ACAGTCAGTA TCCCAGATGC ACTCGTACCA TATTTTGGCA AAAATAAGAT TCAACCCGAA GCCAAATAA
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Protein sequence | MAELGQHQLS LVKKIVLDQR LIRENPKLII EGLQTRGIQV DLGDLQLDIE KLKQIEQQRN LLQAEGNEIG KEVGQKIRSG LDPSSPEIEL LRSSGNTVKK KVNELEELEK AISEKITEEI LHLPNIPDKE CPIGKNETDN VEVRSWGEPL ESKAYKEHWE IAEELQLLDT QRSVKIAKSR FVTLLNQGAR LERALINFML DMHSKKGYLE VLPPVLVNTA SLTASGQLPK FSEESFRCAE DDLWLTPTAE VPLTSLHRGE IIPSEELPIK YVAYTPCFRR EAGSYGRDTR GLIRLHQFNK VELFWFVHPE KSPAAHEQIT KDAESILQAL ELPYRVLELC TGDLGFSASR TYDLEVWLPG ANAYREISSS SICNDFQARR SSIRTKEGKK SRLVHTLNAS GLAIGRTMAA ILENGQNLDG TVSIPDALVP YFGKNKIQPE AK
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