| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_12671 |
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| Symbol | sppA |
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| ID | 5731537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1143119 |
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| End bp | 1143928 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641285636 |
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| Product | signal peptide peptidase SppA (protease IV) |
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| Protein accession | YP_001551152 |
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| Protein GI | 159903808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000540358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCTGGC CTTGGCGTCG TAAATCCAAA AAAAGAATGG CAAGAATCAT TATTGATGGA
GCAATCAATG GTGATACAAG GAAGCTTTTC CTTAAAGCAG TGAAGCAAGT TGAGGAAAGA
GAGTTCCCTG CTTTACTTGT GAGAATTGAT AGTCCAGGAG GGACTGTCGG TGATAGTCAA
GAGATTCATG CAGCTCTTCT CAGACTTAGA GAAAGCGGGT GTCATGTAGT GGCAAGCTTT
GGAAACATAT CTGCTTCTGG AGGAGTATAT GTTGGCGTAG CTGCAGAAAA AATTGTCGCG
AACCCAGGAA CTATAACTGG CTCTATCGGA GTAATACTTC GTGGCAATAA CCTCTCAAAG
CTTCTCGAAA AAATAGGTAT TAAATTTGAG ACCGTCAAAA GTGGTCTTTA TAAAGACATT
CTTTCACCTG ACAGGGCCCT CTCTAAAGAA GAGAGAGAAC TACTTCAATC ACTTATAGAC
AGTAGTTATG GCCAATTTGT AGAAGCAGTT GCGAAAGGGA GAGGTCTAAG TGAAGAAGTG
GTACGTGGCT TTGCAGATGG CAGGGTATTT ACAGGAACTC AAGCCAGAGA GCTTGGCCTA
GTAGATGAAT TAGGAGATGA GAATCATGCA AAGCTTTTGG CTGCAAAGCT TGCAGACCTT
GATGAGAAGT TACAACCAAT TACTCTTGGT CGTCCCAAAA AGAAGTTATT AGGATTACTT
CCAGGAGGAA ATATTCTCAG AAATCTTGTA GAACAAGTAA CTATGGAGCT TTCAAATTCA
GGTCAAATCC TTTGGCTCTT CCGACCATAA
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| Protein sequence | MIWPWRRKSK KRMARIIIDG AINGDTRKLF LKAVKQVEER EFPALLVRID SPGGTVGDSQ
EIHAALLRLR ESGCHVVASF GNISASGGVY VGVAAEKIVA NPGTITGSIG VILRGNNLSK
LLEKIGIKFE TVKSGLYKDI LSPDRALSKE ERELLQSLID SSYGQFVEAV AKGRGLSEEV
VRGFADGRVF TGTQARELGL VDELGDENHA KLLAAKLADL DEKLQPITLG RPKKKLLGLL
PGGNILRNLV EQVTMELSNS GQILWLFRP
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