Gene P9211_12621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12621 
Symbol 
ID5731309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1137398 
End bp1138513 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content34% 
IMG OID641285631 
Producthypothetical protein 
Protein accessionYP_001551147 
Protein GI159903803 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.172184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00175811 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGATA TTTCTATCAG CAATTTAAGA CTCTCTATTG TTTTGCCAAC TTTTAGAGAG 
AGGGAAAATA TACCTCAAAT TGTTGAGCAA TTATTTAAGT TAGGAAGTTA TTATGAACTA
GAGATTCTTA TCATAGATGA TGATTCCCGT GATGGTACTT TCGACTTTGT TAAAAATCTC
TCTATAGAGG ATCATCGCGT AAGGATAATT AGACGGGTCG GTCGCTCTGG ACTGGCTAGT
GCAATTAAAG AAGGCTTTTT AAATGCAACT GGTGATATTG TTGCTTTGAT GGATGCTGAT
GGCCAACATC AACCAGTAGA TGTTTTTAAA GCAATTGATT ATTTAATTTC CAATAACTAT
GACTTAGTAA TTGGGAGTAG ATTTTTAGAG AGAGCAAATA TTCTTGGATT AAGCCAAAGA
AGGGTAGGTG GATCTTCTAT GGCAAACTAT GTTGCTAAAT TAAGCTTACC TAAAAATTAT
AATCATATAA CTGATTATAT GAGTGGATGC TTTGTTTTAA GGTTAAATAA ATGCTTGCCA
ATTATATACA AAGTAGATGT TAATGGCTTT AAATTTTTGT ATGAGTTTTT AGCTTTAACT
AAAGGAAGGC TATGGGTTGG AGAGGTGCCA TTAAGTTTTC AGCCTAGATT ACATGGGACT
TCAAAATTAG ATATATCTAT TGTATGGGAT TTTATGATCT CACTTTTGCA TACTTTGTCT
TGCAGAATCC TTCCTAGACG GGCAATAAGC TTTGCAATTG TTGGTTTGAC TGGTGTTGGT
GTTCAGTTGG TTGCAACTAA TATAATGATG AGATTTTTTC TTTTAACCTT TAAAGAAGCA
CTTCCAATAG CTGTAATAAG TGCGGCAACC TCAAATTATC TAATTAACAA TGCATTGACT
TTCAGGTCAA AAAGGCTAGC TGGCATAAGT TTATTAAAAG GACTTCTTAA GTTCCTTTTA
GTTGCATCTT TCCCAGTAAT AGCAAATGTT GGACTTGCCA CAGCGTTTTA TAACATTGTG
TCTGAGAATG AGACTTGGGC ACAGCTTGCT GGCATCTCAA TAGTATTTAT CTGGAATTAT
GTTGCTTCTT CAAGGTTTGT CTGGAATACT CCTTAA
 
Protein sequence
MPDISISNLR LSIVLPTFRE RENIPQIVEQ LFKLGSYYEL EILIIDDDSR DGTFDFVKNL 
SIEDHRVRII RRVGRSGLAS AIKEGFLNAT GDIVALMDAD GQHQPVDVFK AIDYLISNNY
DLVIGSRFLE RANILGLSQR RVGGSSMANY VAKLSLPKNY NHITDYMSGC FVLRLNKCLP
IIYKVDVNGF KFLYEFLALT KGRLWVGEVP LSFQPRLHGT SKLDISIVWD FMISLLHTLS
CRILPRRAIS FAIVGLTGVG VQLVATNIMM RFFLLTFKEA LPIAVISAAT SNYLINNALT
FRSKRLAGIS LLKGLLKFLL VASFPVIANV GLATAFYNIV SENETWAQLA GISIVFIWNY
VASSRFVWNT P