| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_12341 |
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| Symbol | psbC |
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| ID | 5731837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1109667 |
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| End bp | 1111049 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641285602 |
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| Product | photosystem II PsbC protein (CP43) |
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| Protein accession | YP_001551119 |
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| Protein GI | 159903775 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.606702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.098859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATAA TCTTCTAAAA GCTCCCAATC AAAGTATTGA AGAGACGGGT
TATGCCTGGT ATGTAGGTAA TGCTCGTCTA ATCAATCTTT CAGGAAGATT GCTTGGAGCT
CACATAGCCC ATACAGGACT AATGGTCTTT TGGGCAGGAG CCATGATGCT CTATGAAGTT
AGTCACTTCA CCTTCGACAA ACCAATGTGG GAGCAAGGTT TAATCCTTTT GCCTCATGTA
GCCATGTTTG GTTATGGAAT TGGACCGGGT GGAGAAGTTG TTGATGTAAT GCCATATTTC
CAGGCAGGTG TTGTTCACCT TGTAGCTTCA GCAATCCTCG GATTTGGTGG TATTTACCAT
GCCCTTGCAG GTCCTGAAAA ATTAGAAGAG GAGTTCCCAT TCTTTTCAAC TGACTGGAGA
GATAAGGACC AAATGACAAC CATTCTTGGC CGTCATTTAT GTGTTCTTGG CTTAGGAGCA
ATAGCTTTTG CCGCTAACTG GCAATTCCTT GGTGGTCTCT ATGACACATG GGCTCCAGGC
GGTGGTGAGG TGAGATTAAT CACACCTACA ACTGACCCTG GTATCATCTT CGGCTACCTT
TTCCAGACCC CTTGGGGAGG AGGAGGAAAT ATGGTGGGAG TTAATTCAGT TGAAGATATT
GTTGGTGGCC ATTACTACCT AGGAATCATC GAATTAATAG GTGGTCATTT TCACATGCAA
ACCAAACCTT TTGGATGGGC GAGAAGAGCC TTCATTTGGA ATGGCGAAGC TTTACTTAGC
TATGCCCTAG GTGGGTTATG TGTAGCAAGC TTCTACGCAT CTGTATTTGT TTGGTTCAAC
AACACTGCCT ATCCTTCAGA GTTTTACGGA CCAACAAACG CTGAAGCCTC TCAAGCGCAA
AGCTTCACAT TCCTTGTCAG AGACCAGCGG ATAGGTGCAA ACGTTGGAAC CACAATGGGT
CCTACTGGTT TAGGTAAGTA TTTAATGCGT TCTCCAACTG GTGAAATCAT CTTTGGCGGA
GAAACAATGC GTTTTTGGGA CTTCCGTGGT CCTTGGCTTG AACCATTAAG GGGTGAAAAC
GGTCTAAGTT TAGATAAAGT TCAAAATGAT ATACAGCCTT GGCAAGTTCG TCGAGCTGCT
GAATACATGA CGCACGCTCC TAACGCTTCT ATCAACTCAG TTGGTGGAAT CATTACTGAG
CCTAATGCAG TTAACTTTGT AAATCTCCGT CAGTGGCTTG CATCAGCCCA CTTCTTCTTA
GGATGGTTTA CATTTGTTGG CCACCTATGG CATGCAGGAA GAGCCAGAGC TGCTGCGGGC
GGCTTTGAAA AAGGTATCGA TCGCAAGAAC GAGCCTGCCC TTTCAATGCC TGATTTGGAC
TAA
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| Protein sequence | METPFNNLLK APNQSIEETG YAWYVGNARL INLSGRLLGA HIAHTGLMVF WAGAMMLYEV
SHFTFDKPMW EQGLILLPHV AMFGYGIGPG GEVVDVMPYF QAGVVHLVAS AILGFGGIYH
ALAGPEKLEE EFPFFSTDWR DKDQMTTILG RHLCVLGLGA IAFAANWQFL GGLYDTWAPG
GGEVRLITPT TDPGIIFGYL FQTPWGGGGN MVGVNSVEDI VGGHYYLGII ELIGGHFHMQ
TKPFGWARRA FIWNGEALLS YALGGLCVAS FYASVFVWFN NTAYPSEFYG PTNAEASQAQ
SFTFLVRDQR IGANVGTTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGEN
GLSLDKVQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLASAHFFL
GWFTFVGHLW HAGRARAAAG GFEKGIDRKN EPALSMPDLD
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